Difference between revisions of "Ec-08 002270"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-AMP PHOSPHORIBOSYL-AMP] == * smiles: ** C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == * direction: ** REVERSIBLE * common name: ** Ph...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-AMP PHOSPHORIBOSYL-AMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] ==
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* smiles:
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* direction:
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** C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP([O-])(=O)[O-])O)O))C=N2)N=C3))=N))O4)O)O))OP([O-])([O-])=O
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** REVERSIBLE
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* inchi key:
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** InChIKey=RTQMRTSPTLIIHM-KEOHHSTQSA-J
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* common name:
 
* common name:
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** 1-(5-phospho-β-D-ribosyl)-AMP
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** Phosphoribulokinase/uridine kinase
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* molecular weight:
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** P-loop containing nucleoside triphosphate hydrolase
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** 555.288   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.19 EC-2.7.1.19]
 
* Synonym(s):
 
* Synonym(s):
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** 1-(5-phosphoribosyl)-AMP
 
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** phosphoribosyl-AMP
 
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** 5-phosphoribosyl-AMP
 
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** N-(5-phospho-D-ribosyl)-AMP
 
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** N-(5'-phospho-D-ribosyl)-AMP
 
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** N1-(5-phospho-D-ribosyl)-AMP
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[HISTCYCLOHYD-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[RIBULOSE-5P]][c] '''+''' 1 [[ATP]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[D-RIBULOSE-15-P2]][c] '''+''' 1 [[PROTON]][c]
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* [[HISTPRATPHYD-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 D-ribulose 5-phosphate[c] '''+''' 1 ATP[c] '''<=>''' 1 ADP[c] '''+''' 1 D-ribulose-1,5-bisphosphate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-26_002450]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-27_003910]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
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** '''10''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C02741 C02741]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19365 19365]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=59457 59457]
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** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
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* BIGG : 42711
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P23010 P23010]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45480652 45480652]
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** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
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* HMDB : HMDB12276
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** [http://www.uniprot.org/uniprot/P19923 P19923]
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{{#set: smiles=C(C4(C(C(C(N3(C(C2(=C(N(C1(C(C(C(O1)COP([O-])(=O)[O-])O)O))C=N2)N=C3))=N))O4)O)O))OP([O-])([O-])=O}}
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** [http://www.uniprot.org/uniprot/P19924 P19924]
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{{#set: inchi key=InChIKey=RTQMRTSPTLIIHM-KEOHHSTQSA-J}}
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** [http://www.uniprot.org/uniprot/P23015 P23015]
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{{#set: common name=1-(5-phospho-&beta;-D-ribosyl)-AMP}}
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** [http://www.uniprot.org/uniprot/P12033 P12033]
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{{#set: molecular weight=555.288    }}
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** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
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{{#set: common name=1-(5-phosphoribosyl)-AMP|phosphoribosyl-AMP|5-phosphoribosyl-AMP|N-(5-phospho-D-ribosyl)-AMP|N-(5'-phospho-D-ribosyl)-AMP|N1-(5-phospho-D-ribosyl)-AMP}}
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** [http://www.uniprot.org/uniprot/P09559 P09559]
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{{#set: consumed by=HISTCYCLOHYD-RXN}}
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** [http://www.uniprot.org/uniprot/P25697 P25697]
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{{#set: produced by=HISTPRATPHYD-RXN}}
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** [http://www.uniprot.org/uniprot/P93681 P93681]
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** [http://www.uniprot.org/uniprot/P19824 P19824]
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** [http://www.uniprot.org/uniprot/P27774 P27774]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoribulokinase/uridine kinase}}
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{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
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{{#set: ec number=EC-2.7.1.19}}
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{{#set: gene associated=Ec-26_002450|Ec-27_003910}}
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{{#set: in pathway=CALVIN-PWY|PWY-5723}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 22:02, 17 March 2018

Reaction PHOSPHORIBULOKINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoribulokinase/uridine kinase
    • P-loop containing nucleoside triphosphate hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-ribulose 5-phosphate[c] + 1 ATP[c] <=> 1 ADP[c] + 1 D-ribulose-1,5-bisphosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-5723, Rubisco shunt: PWY-5723
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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