Difference between revisions of "Ec-09 000810"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5469 PWY-5469] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-11...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5469 PWY-5469] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-1118]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1217 TAX-1217]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* common name:
 
* common name:
−
** sesamin biosynthesis
+
** partial TCA cycle (obligate autotrophs)
 
* Synonym(s):
 
* Synonym(s):
 +
** TCA cycle VI (obligate autotrophs)
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''1''' reactions found over '''8''' reactions in the full pathway
+
  '''10''' reactions found over '''11''' reactions in the full pathway
−
* [[RXN-17352]]
+
* [[ACONITATEDEHYDR-RXN]]
−
** 30 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Ec-11_001530]]
+
*** [[Ec-16_001000]]
−
*** [[Ec-27_004950]]
+
*** [[Ec-12_000170]]
−
*** [[Ec-08_006020]]
+
−
*** [[Ec-00_008220]]
+
−
*** [[Ec-00_008250]]
+
−
*** [[Ec-11_003410]]
+
−
*** [[Ec-24_002030]]
+
−
*** [[Ec-05_002520]]
+
−
*** [[Ec-17_002430]]
+
−
*** [[Ec-14_006530]]
+
−
*** [[Ec-02_000470]]
+
−
*** [[Ec-02_001740]]
+
−
*** [[Ec-06_003550]]
+
−
*** [[Ec-20_002770]]
+
−
*** [[Ec-19_000230]]
+
−
*** [[Ec-02_003170]]
+
−
*** [[Ec-05_003380]]
+
−
*** [[Ec-00_010030]]
+
−
*** [[Ec-24_002370]]
+
−
*** [[Ec-28_003740]]
+
−
*** [[Ec-04_004690]]
+
−
*** [[Ec-02_001210]]
+
−
*** [[Ec-26_000310]]
+
−
*** [[Ec-16_000240]]
+
−
*** [[Ec-17_002450]]
+
−
*** [[Ec-19_001450]]
+
−
*** [[Ec-00_008240]]
+
−
*** [[Ec-02_001880]]
+
−
*** [[Ec-00_008210]]
+
−
*** [[Ec-14_002880]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 +
* [[ACONITATEHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-16_001000]]
 +
*** [[Ec-12_000170]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[ASPAMINOTRANS-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Ec-03_003270]]
 +
*** [[Ec-01_007480]]
 +
*** [[Ec-23_003500]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[CITSYN-RXN]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-25_001360]]
 +
*** [[Ec-23_003460]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[GLUTDEHYD-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-06_008240]]
 +
*** [[Ec-12_008040]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[ISOCITDEH-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-11_003080]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-10_006200]]
 +
*** [[Ec-02_003100]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[PEPCARBOX-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-28_003470]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-10_000030]]
 +
*** [[Ec-02_001020]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17351 RXN-17351]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14970 RXN-14970]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8677 RXN-8677]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8695 RXN-8695]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8696 RXN-8696]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8703 RXN-8703]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8704 RXN-8704]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8705 RXN-8705]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33090}}
+
{{#set: taxonomic range=TAX-1118}}
−
{{#set: common name=sesamin biosynthesis}}
+
{{#set: taxonomic range=TAX-1217}}
−
{{#set: reaction found=1}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: total reaction=8}}
+
{{#set: common name=partial TCA cycle (obligate autotrophs)}}
−
{{#set: completion rate=13.0}}
+
{{#set: common name=TCA cycle VI (obligate autotrophs)}}
 +
{{#set: reaction found=10}}
 +
{{#set: total reaction=11}}
 +
{{#set: completion rate=91.0}}

Revision as of 13:10, 21 March 2018

Pathway PWY-5913

  • taxonomic range:
  • common name:
    • partial TCA cycle (obligate autotrophs)
  • Synonym(s):
    • TCA cycle VI (obligate autotrophs)

Reaction(s) found

10 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-09_000810&oldid=16210"