Difference between revisions of "Ec-21 000330"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** Class II glu...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** Class II glutamine amidotransferase domain
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** pyridine nucleotide cycling (plants)
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** Amidophosphoribosyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.2.14 EC-2.4.2.14]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''11''' reactions in the full pathway
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** 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''<=>''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PRPP]][c]
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* [[NAD-SYNTH-GLN-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 5-phospho-&beta;-D-ribosylamine[c] '''<=>''' 1 L-glutamine[c] '''+''' 1 H2O[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c]
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*** [[Ec-14_000810]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-02_005190]]
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* [[NICONUCADENYLYLTRAN-RXN]]
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** ESILICULOSUS_GENOME
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** 0 associated gene:
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[aragem]]
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-07_005050]]
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* [[NICOTINATEPRIBOSYLTRANS-RXN]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Ec-27_002350]]
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** [[pantograph]]-[[aragem]]
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
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*** [[orthology-aragem]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[RXN-5841]]
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
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** 3 associated gene(s):
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** '''3''' reactions found over '''5''' reactions in the full pathway
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*** [[Ec-12_005060]]
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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*** [[Ec-15_000820]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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*** [[Ec-05_000950]]
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** 1 reconstruction source(s) associated:
−
** '''5''' reactions found over '''9''' reactions in the full pathway
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*** [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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* [[RXN-8443]]
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* Category: [[orthology]]
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** 137 associated gene(s):
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** Source: [[orthology-aragem]]
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*** [[Ec-20_001460]]
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*** Tool: [[pantograph]]
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*** [[Ec-10_004370]]
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* Category: [[annotation]]
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*** [[Ec-01_003040]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-01_005280]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-20_004730]]
 +
*** [[Ec-02_003160]]
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*** [[Ec-13_004630]]
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*** [[Ec-03_001800]]
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*** [[Ec-13_004480]]
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*** [[Ec-17_001910]]
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*** [[Ec-13_004470]]
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*** [[Ec-03_000730]]
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*** [[Ec-23_000730]]
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*** [[Ec-13_004620]]
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*** [[Ec-03_000710]]
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*** [[Ec-06_010590]]
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*** [[Ec-21_005740]]
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*** [[Ec-25_000800]]
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*** [[Ec-16_003140]]
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*** [[Ec-00_007610]]
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*** [[Ec-25_002150]]
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*** [[Ec-27_003090]]
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*** [[Ec-13_004810]]
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*** [[Ec-20_002410]]
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*** [[Ec-25_000050]]
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*** [[Ec-15_004730]]
 +
*** [[Ec-01_002500]]
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*** [[Ec-03_005360]]
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*** [[Ec-18_001430]]
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*** [[Ec-20_003730]]
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*** [[Ec-04_001940]]
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*** [[Ec-18_002880]]
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*** [[Ec-02_003690]]
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*** [[Ec-10_000810]]
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*** [[Ec-06_001940]]
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*** [[Ec-04_004550]]
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*** [[Ec-08_006680]]
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*** [[Ec-13_004490]]
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*** [[Ec-04_000460]]
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*** [[Ec-03_000720]]
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*** [[Ec-11_000030]]
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*** [[Ec-14_002550]]
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*** [[Ec-18_001580]]
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*** [[Ec-19_003770]]
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*** [[Ec-04_002300]]
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*** [[Ec-18_001480]]
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*** [[Ec-06_000720]]
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*** [[Ec-23_004280]]
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*** [[Ec-09_000670]]
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*** [[Ec-06_002670]]
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*** [[Ec-23_000620]]
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*** [[Ec-06_002270]]
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*** [[Ec-13_000540]]
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*** [[Ec-03_000050]]
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*** [[Ec-02_005360]]
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*** [[Ec-03_000700]]
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*** [[Ec-06_007660]]
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*** [[Ec-02_001860]]
 +
*** [[Ec-19_000480]]
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*** [[Ec-04_001890]]
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*** [[Ec-19_000130]]
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*** [[Ec-13_000550]]
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*** [[Ec-24_000510]]
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*** [[Ec-18_001440]]
 +
*** [[Ec-01_011080]]
 +
*** [[Ec-12_003120]]
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*** [[Ec-15_004850]]
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*** [[Ec-00_006990]]
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*** [[Ec-06_001850]]
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*** [[Ec-02_003150]]
 +
*** [[Ec-13_004500]]
 +
*** [[Ec-06_001640]]
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*** [[Ec-18_001470]]
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*** [[Ec-19_000380]]
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*** [[Ec-02_003750]]
 +
*** [[Ec-22_003010]]
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*** [[Ec-05_004440]]
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*** [[Ec-18_001450]]
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*** [[Ec-03_000140]]
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*** [[Ec-04_001900]]
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*** [[Ec-26_001500]]
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*** [[Ec-15_004720]]
 +
*** [[Ec-21_005750]]
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*** [[Ec-23_001960]]
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*** [[Ec-03_001790]]
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*** [[Ec-08_005990]]
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*** [[Ec-01_001800]]
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*** [[Ec-sdr_f_000110]]
 +
*** [[Ec-10_000570]]
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*** [[Ec-01_011660]]
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*** [[Ec-20_001110]]
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*** [[Ec-19_000120]]
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*** [[Ec-02_003700]]
 +
*** [[Ec-02_001850]]
 +
*** [[Ec-19_000290]]
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*** [[Ec-04_001950]]
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*** [[Ec-18_002840]]
 +
*** [[Ec-06_001840]]
 +
*** [[Ec-17_002300]]
 +
*** [[Ec-19_000110]]
 +
*** [[Ec-19_001520]]
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*** [[Ec-03_004940]]
 +
*** [[Ec-05_003570]]
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*** [[Ec-22_003740]]
 +
*** [[Ec-03_000780]]
 +
*** [[Ec-02_005150]]
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*** [[Ec-13_000610]]
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*** [[Ec-12_003110]]
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*** [[Ec-13_002040]]
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*** [[Ec-15_004840]]
 +
*** [[Ec-15_003900]]
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*** [[Ec-10_004500]]
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*** [[Ec-02_001820]]
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*** [[Ec-19_000270]]
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*** [[Ec-07_001300]]
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*** [[Ec-21_001650]]
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*** [[Ec-25_003640]]
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*** [[Ec-16_004800]]
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*** [[Ec-15_000530]]
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*** [[Ec-13_002010]]
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*** [[Ec-11_006290]]
 +
*** [[Ec-04_002070]]
 +
*** [[Ec-13_004610]]
 +
*** [[Ec-09_000980]]
 +
*** [[Ec-23_000190]]
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*** [[Ec-04_003890]]
 +
*** [[Ec-11_004850]]
 +
*** [[Ec-23_000950]]
 +
*** [[Ec-06_001650]]
 +
*** [[Ec-11_005360]]
 +
*** [[Ec-25_000790]]
 +
*** [[Ec-00_002000]]
 +
*** [[Ec-02_001910]]
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*** [[Ec-21_003710]]
 +
*** [[Ec-03_000770]]
 +
*** [[Ec-01_001760]]
 +
*** [[Ec-01_001850]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aragem]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=NICOTINAMID-RXN NICOTINAMID-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=NMNNUCLEOSID-RXN NMNNUCLEOSID-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8441 RXN-8441]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8442 RXN-8442]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8444 RXN-8444]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-33090}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14905 14905]
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{{#set: common name=pyridine nucleotide cycling (plants)}}
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* LIGAND-RXN:
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{{#set: reaction found=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01072 R01072]
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{{#set: total reaction=11}}
−
* UNIPROT:
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{{#set: completion rate=45.0}}
−
** [http://www.uniprot.org/uniprot/P28173 P28173]
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−
** [http://www.uniprot.org/uniprot/P35433 P35433]
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−
** [http://www.uniprot.org/uniprot/Q06203 Q06203]
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−
** [http://www.uniprot.org/uniprot/O29388 O29388]
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** [http://www.uniprot.org/uniprot/O67236 O67236]
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−
** [http://www.uniprot.org/uniprot/P65829 P65829]
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−
** [http://www.uniprot.org/uniprot/O57979 O57979]
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−
** [http://www.uniprot.org/uniprot/Q9X0X4 Q9X0X4]
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−
** [http://www.uniprot.org/uniprot/Q9RXT6 Q9RXT6]
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−
** [http://www.uniprot.org/uniprot/Q9K0C4 Q9K0C4]
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−
** [http://www.uniprot.org/uniprot/Q9V253 Q9V253]
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** [http://www.uniprot.org/uniprot/Q9PIT3 Q9PIT3]
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−
** [http://www.uniprot.org/uniprot/Q57657 Q57657]
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−
** [http://www.uniprot.org/uniprot/Q9JVC9 Q9JVC9]
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−
** [http://www.uniprot.org/uniprot/O26742 O26742]
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−
** [http://www.uniprot.org/uniprot/P43854 P43854]
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** [http://www.uniprot.org/uniprot/P35853 P35853]
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−
** [http://www.uniprot.org/uniprot/P41390 P41390]
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−
** [http://www.uniprot.org/uniprot/Q27601 Q27601]
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** [http://www.uniprot.org/uniprot/Q38999 Q38999]
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−
** [http://www.uniprot.org/uniprot/P04046 P04046]
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−
** [http://www.uniprot.org/uniprot/Q55621 Q55621]
+
−
** [http://www.uniprot.org/uniprot/Q55038 Q55038]
+
−
** [http://www.uniprot.org/uniprot/Q9STG9 Q9STG9]
+
−
** [http://www.uniprot.org/uniprot/Q9T0J5 Q9T0J5]
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−
** [http://www.uniprot.org/uniprot/P52418 P52418]
+
−
** [http://www.uniprot.org/uniprot/P52419 P52419]
+
−
** [http://www.uniprot.org/uniprot/Q22134 Q22134]
+
−
** [http://www.uniprot.org/uniprot/Q9ZB05 Q9ZB05]
+
−
** [http://www.uniprot.org/uniprot/P00497 P00497]
+
−
** [http://www.uniprot.org/uniprot/P0AG16 P0AG16]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Class II glutamine amidotransferase domain}}
+
−
{{#set: common name=Amidophosphoribosyltransferase}}
+
−
{{#set: ec number=EC-2.4.2.14}}
+
−
{{#set: gene associated=Ec-02_005190|Ec-07_005050}}
+
−
{{#set: in pathway=PWY-6121|PWY-6122|PWY-7282|PWY-6277}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:10, 21 March 2018

Pathway PWY-5381

  • taxonomic range:
  • common name:
    • pyridine nucleotide cycling (plants)
  • Synonym(s):

Reaction(s) found

5 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_000330&oldid=16227"