Difference between revisions of "Ec-23 000740"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-171 RXN-171] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-171 RXN-171] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
 
* Synonym(s):
 
* Synonym(s):
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** palmitoleic acid biosynthesis I
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** palmitoleate biosynthesis (anaerobic)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''9''' reactions in the full pathway
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** 1 [[CPD1F-134]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[CPD-482]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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* [[RXN-10654]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 gibberellin A9[c] '''+''' 1 oxygen[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 gibberellin A51[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
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*** [[Ec-27_003480]]
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*** [[Ec-12_000640]]
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== Genes associated with this reaction  ==
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*** [[Ec-12_000650]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-27_002090]]
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* [[Ec-19_002750]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[aragem]]
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-19_002760]]
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* [[RXN-10655]]
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** [[pantograph]]-[[aragem]]
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** 1 associated gene(s):
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* [[Ec-08_003510]]
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*** [[Ec-01_007100]]
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** [[pantograph]]-[[aragem]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-102]], gibberellin inactivation I (2β-hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-102 PWY-102]
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* [[RXN-10656]]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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** 0 associated gene:
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** Source: [[orthology-aragem]]
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* [[RXN-10657]]
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*** Tool: [[pantograph]]
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** 1 associated gene(s):
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*** [[Ec-27_002470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10658]]
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** 4 associated gene(s):
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*** [[Ec-12_000640]]
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*** [[Ec-12_000650]]
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*** [[Ec-27_002090]]
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*** [[Ec-27_003480]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10659]]
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** 1 associated gene(s):
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*** [[Ec-01_007100]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-10660]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[RXN-10661]]
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** 1 associated gene(s):
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*** [[Ec-27_002470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-9550]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R06337 R06337]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6282 PWY-6282]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-1.14.11}}
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{{#set: common name=palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)}}
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{{#set: gene associated=Ec-19_002750|Ec-19_002760|Ec-08_003510}}
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{{#set: common name=palmitoleic acid biosynthesis I|palmitoleate biosynthesis (anaerobic)}}
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{{#set: in pathway=PWY-102}}
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{{#set: reaction found=9}}
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{{#set: reconstruction category=orthology}}
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{{#set: total reaction=9}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 13:11, 21 March 2018

Pathway PWY-6282

  • taxonomic range:
  • common name:
    • palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
  • Synonym(s):
    • palmitoleic acid biosynthesis I
    • palmitoleate biosynthesis (anaerobic)

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-23_000740&oldid=16271"