Difference between revisions of "DNA-With-Pyrimidine-Dimers"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14897 RXN-14897] == * direction: ** LEFT-TO-RIGHT * common name: ** Pectin lyase fold * ec numb...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_K+ ExchangeSeed_K+] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula =...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14897 RXN-14897] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_K+ ExchangeSeed_K+] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
* common name:
+
** Pectin lyase fold
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.2.10 EC-4.2.2.10]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[Pectin]][c] '''=>''' 1 [[CPD-11241]][c]
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** 1.0 [[K+]][C-BOUNDARY] '''<=>''' 1.0 [[K+]][e]
 
* With common name(s):
 
* With common name(s):
** 1 a pectin[c] '''=>''' 1 4-(4-deoxy-&alpha;-D-galact-4-enuronosyl)-D-galacturonate[c]
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** 1.0 K+[C-BOUNDARY] '''<=>''' 1.0 K+[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Ec-00_009490]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-00_011490]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-23_004040]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-18_004360]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-25_001080]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-20_003100]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-13_002650]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-20_003120]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-09_004230]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-12_000410]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-00_006370]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-08_000930]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-02_001160]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-08_000920]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-13_002640]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-00_010800]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-13_002330]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-21_001490]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-21_001360]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-08_000940]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-14_000190]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-02_001170]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-04_001770]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-14_004740]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-13_002310]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-08_000860]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-14_000350]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-21_003140]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
* [[Ec-09_004260]]
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7243]], pectin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7243 PWY-7243]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[annotation]]
+
* Category: [[manual]]
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[manual-import_from_medium]]
*** Tool: [[pathwaytools]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
{{#set: common name=Pectin lyase fold}}
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{{#set: in pathway=}}
{{#set: ec number=EC-4.2.2.10}}
+
{{#set: reconstruction category=manual}}
{{#set: gene associated=Ec-00_009490|Ec-00_011490|Ec-23_004040|Ec-18_004360|Ec-25_001080|Ec-20_003100|Ec-13_002650|Ec-20_003120|Ec-09_004230|Ec-12_000410|Ec-00_006370|Ec-08_000930|Ec-02_001160|Ec-08_000920|Ec-13_002640|Ec-00_010800|Ec-13_002330|Ec-21_001490|Ec-21_001360|Ec-08_000940|Ec-14_000190|Ec-02_001170|Ec-04_001770|Ec-14_004740|Ec-13_002310|Ec-08_000860|Ec-14_000350|Ec-21_003140|Ec-09_004260}}
+
{{#set: reconstruction source=manual-import_from_medium}}
{{#set: in pathway=PWY-7243}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:11, 21 March 2018

Reaction ExchangeSeed_K+

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 K+[C-BOUNDARY] <=> 1.0 K+[e]
  • With common name(s):
    • 1.0 K+[C-BOUNDARY] <=> 1.0 K+[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links