Difference between revisions of "PHOSLIPSYN2-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
(Created page with "Category:Gene == Gene Ec-27_005680 == * left end position: ** 5244299 * transcription direction: ** NEGATIVE * right end position: ** 5253548 * centisome position: ** 81.3...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] ==
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== Gene Ec-27_005680 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5244299
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7]
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** NEGATIVE
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* right end position:
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** 5253548
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* centisome position:
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** 81.308136   
 
* Synonym(s):
 
* Synonym(s):
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** dihydropicolinate synthetase
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** Esi_0000_0144
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** dihydrodipicolinic acid synthase
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** Esi0000_0144
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CARBODEHYDRAT-RXN]]
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** 1 [[PYRUVATE]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-14443]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 pyruvate[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 H+[c] '''+''' 1 H2O[c] '''+''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c]
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* Reaction: [[RXN0-5224]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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* [[PWY-241]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWYQT-4429]]
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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* [[PWY-7117]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7115]]
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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* [[PWY-6142]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[CYANCAT-PWY]]
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=5244299}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
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{{#set: right end position=5253548}}
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* UNIPROT:
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{{#set: centisome position=81.308136    }}
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** [http://www.uniprot.org/uniprot/P43797 P43797]
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{{#set: common name=Esi_0000_0144|Esi0000_0144}}
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** [http://www.uniprot.org/uniprot/O26892 O26892]
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{{#set: reaction associated=CARBODEHYDRAT-RXN|RXN0-5224}}
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** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
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{{#set: pathway associated=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
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** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
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** [http://www.uniprot.org/uniprot/P19808 P19808]
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** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
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** [http://www.uniprot.org/uniprot/O05969 O05969]
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** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
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** [http://www.uniprot.org/uniprot/Q04796 Q04796]
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** [http://www.uniprot.org/uniprot/Q57695 Q57695]
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** [http://www.uniprot.org/uniprot/O25657 O25657]
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** [http://www.uniprot.org/uniprot/O67216 O67216]
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** [http://www.uniprot.org/uniprot/O29352 O29352]
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** [http://www.uniprot.org/uniprot/O84366 O84366]
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** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
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** [http://www.uniprot.org/uniprot/P63945 P63945]
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** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
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** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
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** [http://www.uniprot.org/uniprot/Q43038 Q43038]
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** [http://www.uniprot.org/uniprot/P49423 P49423]
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** [http://www.uniprot.org/uniprot/Q55513 Q55513]
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** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
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** [http://www.uniprot.org/uniprot/Q42948 Q42948]
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** [http://www.uniprot.org/uniprot/Q42940 Q42940]
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** [http://www.uniprot.org/uniprot/O86841 O86841]
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** [http://www.uniprot.org/uniprot/P24847 P24847]
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** [http://www.uniprot.org/uniprot/P24846 P24846]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.3.3.7}}
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{{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
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{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}
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Revision as of 13:12, 21 March 2018

Gene Ec-27_005680

  • left end position:
    • 5244299
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5253548
  • centisome position:
    • 81.308136
  • Synonym(s):
    • Esi_0000_0144
    • Esi0000_0144

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PHOSLIPSYN2-PWY&oldid=16461"