Difference between revisions of "RXN-2542"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-08_006680 == * left end position: ** 6664423 * transcription direction: ** NEGATIVE * right end position: ** 6672482 * centisome position: ** 99.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.148-RXN 2.7.1.148-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GHMP kinase N-termi...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-08_006680 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.148-RXN 2.7.1.148-RXN] ==
−
* left end position:
+
* direction:
−
** 6664423
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** GHMP kinase N-terminal domain
−
* right end position:
+
* ec number:
−
** 6672482
+
** [http://enzyme.expasy.org/EC/2.7.1.148 EC-2.7.1.148]
−
* centisome position:
+
−
** 99.51257   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0005_0005
 
−
** Esi0005_0005
 
−
** MAPK
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[2.7.11.24-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''+''' 1 [[ADP]][c]
−
***go-term
+
* With common name(s):
−
* [[RXN-8443]]
+
** 1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''+''' 1 ADP[c]
−
** [[pantograph]]-[[aragem]]
+
 
−
== Pathways associated ==
+
== Genes associated with this reaction  ==
−
* [[PWY-5381]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-10_001370]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
== Pathways ==
 +
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=6664423}}
+
* RHEA:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18437 18437]
−
{{#set: right end position=6672482}}
+
* LIGAND-RXN:
−
{{#set: centisome position=99.51257    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05634 R05634]
−
{{#set: common name=Esi_0005_0005|Esi0005_0005|MAPK}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction associated=2.7.11.24-RXN|RXN-8443}}
+
{{#set: common name=GHMP kinase N-terminal domain}}
−
{{#set: pathway associated=PWY-5381}}
+
{{#set: ec number=EC-2.7.1.148}}
 +
{{#set: gene associated=Ec-10_001370}}
 +
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:12, 21 March 2018

Reaction 2.7.1.148-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GHMP kinase N-terminal domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-2542&oldid=16486"