Difference between revisions of "RXN-12588"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7686 PWY-7686] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9549 RXN-9549] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7686 PWY-7686] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9549 RXN-9549] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
* ec number:
−
* common name:
+
** [http://enzyme.expasy.org/EC/3.1.2.14 EC-3.1.2.14]
−
** L-malate degradation II
+
 
* Synonym(s):
 
* Synonym(s):
−
** (S)--malate degradation II
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
  '''1''' reactions found over '''1''' reactions in the full pathway
+
* With identifiers:
−
* [[1.1.1.39-RXN]]
+
** 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
−
** 3 associated gene(s):
+
* With common name(s):
−
*** [[Ec-01_003680]]
+
** 1 a palmitoyl-[acp][c] '''+''' 1 H2O[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
−
*** [[Ec-07_002070]]
+
 
−
*** [[Ec-07_002060]]
+
== Genes associated with this reaction  ==
−
** 1 reconstruction source(s) associated:
+
== Pathways ==
−
*** [[annotation-esiliculosus_genome]]
+
* [[PWY-7746]], mycobacterial sulfolipid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7746 PWY-7746]
−
== Reaction(s) not found ==
+
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 +
** '''28''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''20''' reactions found over '''31''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[gap-filling]]
 +
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33154}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30130 30130]
−
{{#set: common name=L-malate degradation II}}
+
* LIGAND-RXN:
−
{{#set: common name=(S)--malate degradation II}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01706 R01706]
−
{{#set: reaction found=1}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: total reaction=1}}
+
{{#set: ec number=EC-3.1.2.14}}
−
{{#set: completion rate=100.0}}
+
{{#set: in pathway=PWY-7746|PWY-5971|PWY-5994}}
 +
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
 +
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 14:12, 21 March 2018

Reaction RXN-9549

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a palmitoyl-[acp][c] + 1 H2O[c] => 1 a holo-[acyl-carrier protein][c] + 1 palmitate[c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-7746, mycobacterial sulfolipid biosynthesis: PWY-7746
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 28 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 20 reactions found over 31 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12588&oldid=16515"