Difference between revisions of "RXN-12588"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7686 PWY-7686] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9549 RXN-9549] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7686 PWY-7686] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9549 RXN-9549] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/3.1.2.14 EC-3.1.2.14]
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** L-malate degradation II
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* Synonym(s):
 
* Synonym(s):
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** (S)--malate degradation II
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''1''' reactions found over '''1''' reactions in the full pathway
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* With identifiers:
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* [[1.1.1.39-RXN]]
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** 1 [[Palmitoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-01_003680]]
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** 1 a palmitoyl-[acp][c] '''+''' 1 H2O[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
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*** [[Ec-07_002070]]
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*** [[Ec-07_002060]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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== Pathways ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-7746]], mycobacterial sulfolipid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7746 PWY-7746]
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== Reaction(s) not found ==
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''20''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33154}}
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30130 30130]
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{{#set: common name=L-malate degradation II}}
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* LIGAND-RXN:
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{{#set: common name=(S)--malate degradation II}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01706 R01706]
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{{#set: reaction found=1}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=1}}
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{{#set: ec number=EC-3.1.2.14}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=PWY-7746|PWY-5971|PWY-5994}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}

Revision as of 13:12, 21 March 2018

Reaction RXN-9549

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a palmitoyl-[acp][c] + 1 H2O[c] => 1 a holo-[acyl-carrier protein][c] + 1 palmitate[c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-7746, mycobacterial sulfolipid biosynthesis: PWY-7746
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 28 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 20 reactions found over 31 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12588&oldid=16515"