Difference between revisions of "HS"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec nu...")
(Created page with "Category:Gene == Gene Ec-08_005990 == * left end position: ** 5754796 * transcription direction: ** NEGATIVE * right end position: ** 5765157 * centisome position: ** 85.9...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7784 RXN-7784] ==
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== Gene Ec-08_005990 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5754796
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* common name:
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* transcription direction:
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** NAD(P)-binding domain
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
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** 5765157
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* centisome position:
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** 85.93010   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0005_0168
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** Esi0005_0168
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** MAPK
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[CPD-7087]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7088]][c] '''+''' 1 [[NADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 NADPH[c] '''+''' 1 (+)-dihydromyricetin[c] '''+''' 2 H+[c] '''=>''' 1 (2R,3S,4S)-leucodelphinidin[c] '''+''' 1 NADP+[c]
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* Reaction: [[RXN-8443]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_001350]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-12_005240]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-23_001220]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5152]], leucodelphinidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[annotation]]
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* [[PWY-5381]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=5754796}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05038 R05038]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5765157}}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: centisome position=85.93010    }}
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{{#set: ec number=EC-1.1.1.219}}
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{{#set: common name=Esi_0005_0168|Esi0005_0168|MAPK}}
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{{#set: gene associated=Ec-12_001350|Ec-12_005240|Ec-23_001220}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN|RXN-8443}}
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{{#set: in pathway=PWY-5152}}
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{{#set: pathway associated=PWY-5381}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:12, 21 March 2018

Gene Ec-08_005990

  • left end position:
    • 5754796
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5765157
  • centisome position:
    • 85.93010
  • Synonym(s):
    • Esi_0005_0168
    • Esi0005_0168
    • MAPK

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=HS&oldid=16516"