Difference between revisions of "RXN-16042"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7163 RXN-7163] == * direction: ** LEFT-TO-RIGHT * common name: ** Inositol polyphosphate kinase...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7163 RXN-7163] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3035 TAX-3035]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
+
 
* common name:
 
* common name:
−
** TCA cycle IV (2-oxoglutarate decarboxylase)
+
** Inositol polyphosphate kinase
 +
** inositol pentakisphosphate 2-kinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.158 EC-2.7.1.158]
 
* Synonym(s):
 
* Synonym(s):
−
** citric acid cycle
 
−
** tricarboxylic acid cycle
 
−
** Szent-Gyorgyi-Krebs cycle
 
−
** Krebs cycle
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''9''' reactions found over '''11''' reactions in the full pathway
+
* With identifiers:
−
* [[ACONITATEDEHYDR-RXN]]
+
** 1 [[ATP]][c] '''+''' 1 [[CPD-1107]][c] '''=>''' 1 [[MI-HEXAKISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Ec-16_001000]]
+
** 1 ATP[c] '''+''' 1 D-myo-inositol 1,3,4,5,6-pentakisphosphate[c] '''=>''' 1 phytate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
−
*** [[Ec-12_000170]]
+
 
−
** 1 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-esiliculosus_genome]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[ACONITATEHYDR-RXN]]
+
* Gene: [[Ec-16_003350]]
−
** 2 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-12_000170]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[Ec-16_001000]]
+
* Gene: [[Ec-18_000620]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[annotation-esiliculosus_genome]]
+
*** Assignment: GO-TERM
−
* [[CITSYN-RXN]]
+
== Pathways  ==
−
** 0 associated gene:
+
* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6362 PWY-6362]
−
** 1 reconstruction source(s) associated:
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
*** [[annotation-esiliculosus_genome]]
+
* [[PWY-6361]], 1D-myo-inositol hexakisphosphate biosynthesis I  (from Ins(1,4,5)P3): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6361 PWY-6361]
−
* [[FUMHYDR-RXN]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** 2 associated gene(s):
+
* [[PWY-4661]], 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4661 PWY-4661]
−
*** [[Ec-23_003460]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
*** [[Ec-25_001360]]
+
* [[PWY-6369]], inositol pyrophosphates biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6369 PWY-6369]
−
** 2 reconstruction source(s) associated:
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
*** [[annotation-esiliculosus_genome]]
+
* [[PWY-6554]], 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6554 PWY-6554]
−
*** [[orthology-aragem]]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[ISOCIT-CLEAV-RXN]]
+
* [[PWY-6372]], 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6372 PWY-6372]
−
** 1 associated gene(s):
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
*** [[Ec-12_007550]]
+
== Reconstruction information  ==
−
** 1 reconstruction source(s) associated:
+
* Category: [[annotation]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[ISOCITDEH-RXN]]
+
*** Tool: [[pathwaytools]]
−
** 1 associated gene(s):
+
−
*** [[Ec-11_003080]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[MALATE-DEH-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Ec-10_006200]]
+
−
*** [[Ec-02_003100]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[MALSYN-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-12_003860]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[RXN-14971]]
+
−
** 6 associated gene(s):
+
−
*** [[Ec-07_007310]]
+
−
*** [[Ec-27_006560]]
+
−
*** [[Ec-07_002870]]
+
−
*** [[Ec-11_000360]]
+
−
*** [[Ec-05_003640]]
+
−
*** [[Ec-21_003470]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
== Reaction(s) not found ==
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7774 RXN-7774]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1117}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-3035}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20313 20313]
−
{{#set: taxonomic range=TAX-1224}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-201174}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05202 R05202]
−
{{#set: common name=TCA cycle IV (2-oxoglutarate decarboxylase)}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=citric acid cycle|tricarboxylic acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
+
{{#set: common name=Inositol polyphosphate kinase}}
−
{{#set: reaction found=9}}
+
{{#set: common name=inositol pentakisphosphate 2-kinase}}
−
{{#set: total reaction=11}}
+
{{#set: ec number=EC-2.7.1.158}}
−
{{#set: completion rate=82.0}}
+
{{#set: gene associated=Ec-16_003350|Ec-18_000620}}
 +
{{#set: in pathway=PWY-6362|PWY-6361|PWY-4661|PWY-6369|PWY-6554|PWY-6372}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:12, 21 March 2018

Reaction RXN-7163

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Inositol polyphosphate kinase
    • inositol pentakisphosphate 2-kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 D-myo-inositol 1,3,4,5,6-pentakisphosphate[c] => 1 phytate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): PWY-6362
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6361, 1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3): PWY-6361
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-4661, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza): PWY-4661
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6369, inositol pyrophosphates biosynthesis: PWY-6369
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-6554, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3): PWY-6554
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6372, 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium): PWY-6372
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16042&oldid=16562"