Difference between revisions of "7KAPSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * Wi...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6231 TAX-62...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPONTPRO-RXN SPONTPRO-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6231 TAX-6231]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6157 TAX-6157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6340 TAX-6340]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-6447 TAX-6447]
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* common name:
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** anaerobic energy metabolism (invertebrates, mitochondrial)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''12''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
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* [[1.1.1.39-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 H2O[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 H+[c] '''<=>''' 1 L-glutamate-5-semialdehyde[c]
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*** [[Ec-01_003680]]
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*** [[Ec-07_002070]]
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== Genes associated with this reaction  ==
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*** [[Ec-07_002060]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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*** [[annotation-esiliculosus_genome]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[FUMHYDR-RXN]]
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* [[PWY-6853]], ethylene biosynthesis II (microbes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6853 PWY-6853]
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** 2 associated gene(s):
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** '''2''' reactions found over '''5''' reactions in the full pathway
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*** [[Ec-25_001360]]
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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*** [[Ec-23_003460]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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*** [[annotation-esiliculosus_genome]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[orthology-aragem]]
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* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** 1 associated gene(s):
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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*** [[Ec-01_010970]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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* [[PWY-7770]], indolmycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7770 PWY-7770]
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*** [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5537]]
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** 0 associated gene:
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PYRUVDEH-RXN]]
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** 8 associated gene(s):
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** '''3''' reactions found over '''9''' reactions in the full pathway
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*** [[Ec-27_004160]]
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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*** [[Ec-25_000140]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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*** [[Ec-25_000020]]
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== Reconstruction information  ==
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*** [[Ec-01_010530]]
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* Category: [[annotation]]
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*** [[Ec-23_002710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-27_000530]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-18_000080]]
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*** [[Ec-18_003420]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000030]]
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*** [[Ec-02_001020]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14963 RXN-14963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8807 RXN-8807]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-268 RXN0-268]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-6231}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28234 28234]
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{{#set: taxonomic range=TAX-6157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-6340}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03314 R03314]
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{{#set: taxonomic range=TAX-6447}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=anaerobic energy metabolism (invertebrates, mitochondrial)}}
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{{#set: in pathway=PWY-6922|PWY-6853|PROSYN-PWY|PWY-3341|PROUT-PWY|ARG-PRO-PWY|PWY-7770|PWY-4981|PWY-6344|CITRULBIO-PWY}}
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{{#set: reaction found=6}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=12}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:12, 21 March 2018

Pathway PWY-7384

Reaction(s) found

6 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=7KAPSYN-RXN&oldid=16584"