Difference between revisions of "COUMARYL-ALCOHOL"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.4.1.14-RXN 4.4.1.14-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-aminocyclopropane-1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.4.1.14-RXN 4.4.1.14-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 1-aminocyclopropane-1-carboxylate synthase
+
** DNA photolyase
 +
** deoxyribodipyrimidine photo-lyase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.4.1.14 EC-4.4.1.14]
+
** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-68]][c]
+
** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-methyl-5'-thioadenosine[c] '''+''' 1 H+[c] '''+''' 1 1-aminocyclopropane-1-carboxylate[c]
+
**
−
 
+
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-04_003460]]
+
* Gene: [[Ec-01_008100]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-10_005990]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-16_001260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-01_008080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[ETHYL-PWY]], ethylene biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=ETHYL-PWY ETHYL-PWY]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7270]], L-methionine salvage cycle II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7270 PWY-7270]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21747 21747]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00179 R00179]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23279 P23279]
+
** [http://www.uniprot.org/uniprot/P12769 P12769]
−
** [http://www.uniprot.org/uniprot/Q06402 Q06402]
+
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
−
** [http://www.uniprot.org/uniprot/Q07215 Q07215]
+
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
−
** [http://www.uniprot.org/uniprot/Q42881 Q42881]
+
** [http://www.uniprot.org/uniprot/P12768 P12768]
−
** [http://www.uniprot.org/uniprot/Q00379 Q00379]
+
** [http://www.uniprot.org/uniprot/P27526 P27526]
−
** [http://www.uniprot.org/uniprot/Q06429 Q06429]
+
** [http://www.uniprot.org/uniprot/P25078 P25078]
−
** [http://www.uniprot.org/uniprot/Q9SB01 Q9SB01]
+
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
−
** [http://www.uniprot.org/uniprot/O24062 O24062]
+
** [http://www.uniprot.org/uniprot/P40115 P40115]
−
** [http://www.uniprot.org/uniprot/Q9SB94 Q9SB94]
+
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
−
** [http://www.uniprot.org/uniprot/Q9FUC3 Q9FUC3]
+
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
−
** [http://www.uniprot.org/uniprot/Q94GA4 Q94GA4]
+
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
−
** [http://www.uniprot.org/uniprot/O24217 O24217]
+
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
−
** [http://www.uniprot.org/uniprot/Q9S9C5 Q9S9C5]
+
** [http://www.uniprot.org/uniprot/P05066 P05066]
−
** [http://www.uniprot.org/uniprot/Q43309 Q43309]
+
** [http://www.uniprot.org/uniprot/O24020 O24020]
−
** [http://www.uniprot.org/uniprot/P23599 P23599]
+
** [http://www.uniprot.org/uniprot/O24374 O24374]
−
** [http://www.uniprot.org/uniprot/Q00257 Q00257]
+
** [http://www.uniprot.org/uniprot/P00914 P00914]
−
** [http://www.uniprot.org/uniprot/Q43679 Q43679]
+
−
** [http://www.uniprot.org/uniprot/Q07223 Q07223]
+
−
** [http://www.uniprot.org/uniprot/Q7M286 Q7M286]
+
−
** [http://www.uniprot.org/uniprot/P27486 P27486]
+
−
** [http://www.uniprot.org/uniprot/P18485 P18485]
+
−
** [http://www.uniprot.org/uniprot/P29535 P29535]
+
−
** [http://www.uniprot.org/uniprot/Q41693 Q41693]
+
−
** [http://www.uniprot.org/uniprot/Q41694 Q41694]
+
−
** [http://www.uniprot.org/uniprot/P31531 P31531]
+
−
** [http://www.uniprot.org/uniprot/Q43858 Q43858]
+
−
** [http://www.uniprot.org/uniprot/Q43753 Q43753]
+
−
** [http://www.uniprot.org/uniprot/Q43813 Q43813]
+
−
** [http://www.uniprot.org/uniprot/Q43059 Q43059]
+
−
** [http://www.uniprot.org/uniprot/Q43167 Q43167]
+
−
** [http://www.uniprot.org/uniprot/Q43747 Q43747]
+
−
** [http://www.uniprot.org/uniprot/Q43074 Q43074]
+
−
** [http://www.uniprot.org/uniprot/Q42655 Q42655]
+
−
** [http://www.uniprot.org/uniprot/Q42718 Q42718]
+
−
** [http://www.uniprot.org/uniprot/Q43755 Q43755]
+
−
** [http://www.uniprot.org/uniprot/Q43756 Q43756]
+
−
** [http://www.uniprot.org/uniprot/Q43165 Q43165]
+
−
** [http://www.uniprot.org/uniprot/O22464 O22464]
+
−
** [http://www.uniprot.org/uniprot/Q43166 Q43166]
+
−
** [http://www.uniprot.org/uniprot/Q43168 Q43168]
+
−
** [http://www.uniprot.org/uniprot/Q37001 Q37001]
+
−
** [http://www.uniprot.org/uniprot/Q43201 Q43201]
+
−
** [http://www.uniprot.org/uniprot/Q43204 Q43204]
+
−
** [http://www.uniprot.org/uniprot/O49904 O49904]
+
−
** [http://www.uniprot.org/uniprot/Q42984 Q42984]
+
−
** [http://www.uniprot.org/uniprot/O24220 O24220]
+
−
** [http://www.uniprot.org/uniprot/Q07262 Q07262]
+
−
** [http://www.uniprot.org/uniprot/O24219 O24219]
+
−
** [http://www.uniprot.org/uniprot/P93235 P93235]
+
−
** [http://www.uniprot.org/uniprot/Q9STR4 Q9STR4]
+
−
** [http://www.uniprot.org/uniprot/Q9T065 Q9T065]
+
−
** [http://www.uniprot.org/uniprot/O24609 O24609]
+
−
** [http://www.uniprot.org/uniprot/Q42893 Q42893]
+
−
** [http://www.uniprot.org/uniprot/Q96579 Q96579]
+
−
** [http://www.uniprot.org/uniprot/Q96580 Q96580]
+
−
** [http://www.uniprot.org/uniprot/P93234 P93234]
+
−
** [http://www.uniprot.org/uniprot/O24432 O24432]
+
−
** [http://www.uniprot.org/uniprot/O65017 O65017]
+
−
** [http://www.uniprot.org/uniprot/O65018 O65018]
+
−
** [http://www.uniprot.org/uniprot/Q42668 Q42668]
+
−
** [http://www.uniprot.org/uniprot/O49819 O49819]
+
−
** [http://www.uniprot.org/uniprot/O81957 O81957]
+
−
** [http://www.uniprot.org/uniprot/O65159 O65159]
+
−
** [http://www.uniprot.org/uniprot/Q41688 Q41688]
+
−
** [http://www.uniprot.org/uniprot/O24544 O24544]
+
−
** [http://www.uniprot.org/uniprot/Q39931 Q39931]
+
−
** [http://www.uniprot.org/uniprot/Q9SAR0 Q9SAR0]
+
−
** [http://www.uniprot.org/uniprot/P37821 P37821]
+
−
** [http://www.uniprot.org/uniprot/O24061 O24061]
+
−
** [http://www.uniprot.org/uniprot/Q9M2Y8 Q9M2Y8]
+
−
** [http://www.uniprot.org/uniprot/Q9SMH1 Q9SMH1]
+
−
** [http://www.uniprot.org/uniprot/Q9SEJ9 Q9SEJ9]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=1-aminocyclopropane-1-carboxylate synthase}}
+
{{#set: common name=DNA photolyase}}
−
{{#set: ec number=EC-4.4.1.14}}
+
{{#set: common name=deoxyribodipyrimidine photo-lyase}}
−
{{#set: gene associated=Ec-04_003460}}
+
{{#set: ec number=EC-4.1.99.3}}
−
{{#set: in pathway=ETHYL-PWY|PWY-7270}}
+
{{#set: gene associated=Ec-01_008100|Ec-10_005990|Ec-16_001260|Ec-01_008080}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:13, 21 March 2018

Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DNA photolyase
    • deoxyribodipyrimidine photo-lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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