Difference between revisions of "RXN0-7250"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13415 RXN-13415] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyhypusine synthase * Sy...")
(Created page with "Category:Gene == Gene Ec-01_003780 == * left end position: ** 3149563 * transcription direction: ** POSITIVE * right end position: ** 3152750 * centisome position: ** 30.5...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13415 RXN-13415] ==
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== Gene Ec-01_003780 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3149563
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* common name:
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* transcription direction:
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** Deoxyhypusine synthase
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** POSITIVE
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* right end position:
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** 3152750
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* centisome position:
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** 30.522469   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0003_0314
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** Esi0003_0314
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** STE1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.14.21.6-RXN]]
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** 1 [[CPD-14378]][c] '''+''' 1 [[Deoxyhypusine-Synthase-Lysine]][c] '''=>''' 1 [[CPD-313]][c] '''+''' 1 [[N-4-aminobutylidene-enzyme-lysine]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 dehydrospermidine[c] '''+''' 1 a [deoxyhypusine synthase]-L-lysine[c] '''=>''' 1 propane-1,3-diamine[c] '''+''' 1 a [deoxyhypusine synthase]-N-(4-aminobutylidene)-lysine[c]
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* Reaction: [[RXN-11887]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-13883]]
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* [[Ec-27_002000]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-13892]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5905]], hypusine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5905 PWY-5905]
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*** Assignment: ec-number
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[RXN-16378]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-4209]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN3O-218]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY66-341]]
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* [[PWY-7154]]
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* [[PWY-7155]]
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* [[PWY-2541]]
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* [[PWY-6075]]
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* [[PWY66-3]]
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* [[PWY66-4]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3149563}}
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{{#set: common name=Deoxyhypusine synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Ec-27_002000}}
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{{#set: right end position=3152750}}
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{{#set: in pathway=PWY-5905}}
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{{#set: centisome position=30.522469    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=Esi_0003_0314|Esi0003_0314|STE1}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reaction associated=1.14.21.6-RXN|RXN-11887|RXN-13883|RXN-13892|RXN-16378|RXN-4209|RXN3O-218}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: pathway associated=PWY66-341|PWY-7154|PWY-7155|PWY-2541|PWY-6075|PWY66-3|PWY66-4}}

Revision as of 13:13, 21 March 2018

Gene Ec-01_003780

  • left end position:
    • 3149563
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3152750
  • centisome position:
    • 30.522469
  • Synonym(s):
    • Esi_0003_0314
    • Esi0003_0314
    • STE1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-7250&oldid=16662"