Difference between revisions of "DGDP"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOLACTREDUCTOISOM-RXN ACETOLACTREDUCTOISOM-RXN] == * direction: ** REVERSIBLE * common name: **...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOLACTREDUCTOISOM-RXN ACETOLACTREDUCTOISOM-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3208 TAX-3208]
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* common name:
 
* common name:
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** docosahexaenoate biosynthesis I (lower eukaryotes)
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** Acetohydroxy acid isomeroreductase C-terminal
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.86 EC-1.1.1.86]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''7''' reactions in the full pathway
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* With identifiers:
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* [[RXN-13442]]
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** 1 [[CPD-13357]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[2-ACETO-LACTATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] '''+''' 1 NADP+[c] '''<=>''' 1 (S)-2-acetolactate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c]
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-13443]]
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== Genes associated with this reaction  ==
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** 0 associated gene:
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-09_003170]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-13444]]
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*** Assignment: EC-NUMBER
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** 0 associated gene:
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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*** [[annotation-esiliculosus_genome]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-13445]]
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* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
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** 0 associated gene:
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** '''3''' reactions found over '''5''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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* [[RXN-17688]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Ec-16_002160]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12797 RXN-12797]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16102 RXN-16102]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* RHEA:
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{{#set: taxonomic range=TAX-3041}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22068 22068]
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{{#set: taxonomic range=TAX-3208}}
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* LIGAND-RXN:
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{{#set: common name=docosahexaenoate biosynthesis I (lower eukaryotes)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04439 R04439]
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{{#set: reaction found=5}}
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* UNIPROT:
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/P06168 P06168]
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{{#set: completion rate=71.0}}
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** [http://www.uniprot.org/uniprot/P44822 P44822]
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** [http://www.uniprot.org/uniprot/O25097 O25097]
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** [http://www.uniprot.org/uniprot/Q02138 Q02138]
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** [http://www.uniprot.org/uniprot/Q57179 Q57179]
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** [http://www.uniprot.org/uniprot/Q9JTI3 Q9JTI3]
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** [http://www.uniprot.org/uniprot/Q9PHN5 Q9PHN5]
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** [http://www.uniprot.org/uniprot/P05793 P05793]
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** [http://www.uniprot.org/uniprot/P38674 P38674]
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** [http://www.uniprot.org/uniprot/Q59500 Q59500]
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** [http://www.uniprot.org/uniprot/Q01292 Q01292]
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** [http://www.uniprot.org/uniprot/Q05758 Q05758]
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** [http://www.uniprot.org/uniprot/O82043 O82043]
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** [http://www.uniprot.org/uniprot/P78827 P78827]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Acetohydroxy acid isomeroreductase C-terminal}}
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{{#set: ec number=EC-1.1.1.86}}
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{{#set: gene associated=Ec-09_003170}}
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{{#set: in pathway=VALSYN-PWY|PWY-7111}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:13, 21 March 2018

Reaction ACETOLACTREDUCTOISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Acetohydroxy acid isomeroreductase C-terminal
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] + 1 NADP+[c] <=> 1 (S)-2-acetolactate[c] + 1 H+[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALSYN-PWY, L-valine biosynthesis: VALSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7111, pyruvate fermentation to isobutanol (engineered): PWY-7111
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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