Difference between revisions of "Arachidoyl-ACPs"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ASN ASN] == * smiles: ** C(CC(C(=O)[O-])[N+])(N)=O * inchi key: ** InChIKey=DCXYFEDJOCDNAF-REOH...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** UDP-glucose 4-epim...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ASN ASN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] ==
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* smiles:
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* direction:
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** C(CC(C(=O)[O-])[N+])(N)=O
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** REVERSIBLE
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* inchi key:
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** InChIKey=DCXYFEDJOCDNAF-REOHCLBHSA-N
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* common name:
 
* common name:
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** L-asparagine
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** UDP-glucose 4-epimerase
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* molecular weight:
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* ec number:
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** 132.119   
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** [http://enzyme.expasy.org/EC/5.1.3.2 EC-5.1.3.2]
 
* Synonym(s):
 
* Synonym(s):
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** asparagine
 
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** α-aminosuccinamic acid
 
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** (-)-asparagine
 
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** (S)-2,4-diamino-4-oxobutanoic acid
 
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** (S)-asparagine
 
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** 2,4-diamino-4-oxobutanoic acid, (S)-
 
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** 2-aminosuccinamic acid, L-
 
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** agedoite
 
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** altheine
 
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** asparagine acid
 
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** aspartic acid β-amide
 
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** butanoic acid, 2,4-diamino-4-oxo-, (S)-
 
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** L-2,4-diamino-4-oxobutanoic acid
 
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** L-asparatamine
 
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** L-β-asparagine
 
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** asn
 
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** N
 
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** L-asn
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[ASPARAGHYD-RXN]]
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* With identifiers:
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* [[ASPARAGINE--TRNA-LIGASE-RXN]]
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** 1 [[CPD-12575]][c] '''<=>''' 1 [[CPD-14553]][c]
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* [[biomass_rxn]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 UDP-&alpha;-D-glucose[c] '''<=>''' 1 UDP-&alpha;-D-galactose[c]
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* [[RXN-12460]]
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* [[ASNSYNA-RXN]]
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== Genes associated with this reaction  ==
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* [[ASNSYNB-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* Gene: [[Ec-04_000280]]
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* [[2.6.1.14-RXN-P-HYDROXY-PHENYLPYRUVATE/ASN//2-OXOSUCCINAMATE/TYR.51.]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-04_004180]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-05_006710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
 +
== Pathways  ==
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* [[PWY-7344]], UDP-D-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7344 PWY-7344]
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** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397]
 +
** '''1''' reactions found over '''17''' reactions in the full pathway
 +
* [[COLANSYN-PWY]], colanic acid building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY]
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** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
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** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 70-47-3
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* RHEA:
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* BIGG : 34055
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22168 22168]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6992089 6992089]
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** [http://www.genome.jp/dbget-bin/www_bget?R00291 R00291]
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* HMDB : HMDB00168
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P35673 P35673]
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** [http://www.genome.jp/dbget-bin/www_bget?C00152 C00152]
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** [http://www.uniprot.org/uniprot/P22715 P22715]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P21977 P21977]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58048 58048]
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** [http://www.uniprot.org/uniprot/P24325 P24325]
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* METABOLIGHTS : MTBLC58048
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** [http://www.uniprot.org/uniprot/Q9CE66 Q9CE66]
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{{#set: smiles=C(CC(C(=O)[O-])[N+])(N)=O}}
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** [http://www.uniprot.org/uniprot/Q57664 Q57664]
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{{#set: inchi key=InChIKey=DCXYFEDJOCDNAF-REOHCLBHSA-N}}
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** [http://www.uniprot.org/uniprot/P55180 P55180]
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{{#set: common name=L-asparagine}}
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** [http://www.uniprot.org/uniprot/Q9PNG3 Q9PNG3]
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{{#set: molecular weight=132.119    }}
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** [http://www.uniprot.org/uniprot/P56997 P56997]
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{{#set: common name=asparagine|&alpha;-aminosuccinamic acid|(-)-asparagine|(S)-2,4-diamino-4-oxobutanoic acid|(S)-asparagine|2,4-diamino-4-oxobutanoic acid, (S)-|2-aminosuccinamic acid, L-|agedoite|altheine|asparagine acid|aspartic acid &beta;-amide|butanoic acid, 2,4-diamino-4-oxo-, (S)-|L-2,4-diamino-4-oxobutanoic acid|L-asparatamine|L-&beta;-asparagine|asn|N|L-asn}}
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** [http://www.uniprot.org/uniprot/Q59083 Q59083]
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{{#set: consumed by=ASPARAGHYD-RXN|ASPARAGINE--TRNA-LIGASE-RXN|biomass_rxn}}
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** [http://www.uniprot.org/uniprot/Q44016 Q44016]
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{{#set: produced by=RXN-12460|ASNSYNA-RXN|ASNSYNB-RXN}}
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** [http://www.uniprot.org/uniprot/Q45291 Q45291]
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{{#set: reversible reaction associated=2.6.1.14-RXN-P-HYDROXY-PHENYLPYRUVATE/ASN//2-OXOSUCCINAMATE/TYR.51.}}
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** [http://www.uniprot.org/uniprot/P96995 P96995]
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** [http://www.uniprot.org/uniprot/P45602 P45602]
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** [http://www.uniprot.org/uniprot/P18645 P18645]
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** [http://www.uniprot.org/uniprot/P26503 P26503]
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** [http://www.uniprot.org/uniprot/P40801 P40801]
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** [http://www.uniprot.org/uniprot/Q05026 Q05026]
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** [http://www.uniprot.org/uniprot/P56985 P56985]
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** [http://www.uniprot.org/uniprot/Q51148 Q51148]
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** [http://www.uniprot.org/uniprot/Q56093 Q56093]
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** [http://www.uniprot.org/uniprot/Q42605 Q42605]
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** [http://www.uniprot.org/uniprot/Q60109 Q60109]
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** [http://www.uniprot.org/uniprot/P72903 P72903]
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** [http://www.uniprot.org/uniprot/P72915 P72915]
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** [http://www.uniprot.org/uniprot/O66256 O66256]
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** [http://www.uniprot.org/uniprot/O64749 O64749]
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** [http://www.uniprot.org/uniprot/Q9SN58 Q9SN58]
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** [http://www.uniprot.org/uniprot/Q8VZ26 Q8VZ26]
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** [http://www.uniprot.org/uniprot/Q43070 Q43070]
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** [http://www.uniprot.org/uniprot/Q9T0A7 Q9T0A7]
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** [http://www.uniprot.org/uniprot/O65780 O65780]
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** [http://www.uniprot.org/uniprot/O65781 O65781]
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** [http://www.uniprot.org/uniprot/Q9RMC0 Q9RMC0]
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** [http://www.uniprot.org/uniprot/P04397 P04397]
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** [http://www.uniprot.org/uniprot/P09147 P09147]
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** [http://www.uniprot.org/uniprot/P13226 P13226]
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** [http://www.uniprot.org/uniprot/P09609 P09609]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=UDP-glucose 4-epimerase}}
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{{#set: ec number=EC-5.1.3.2}}
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{{#set: gene associated=Ec-04_000280|Ec-04_004180|Ec-05_006710}}
 +
{{#set: in pathway=PWY-7344|PWY-6397|COLANSYN-PWY|PWY-6527|PWY-7328|PWY-6317|PWY66-422|PWY-3821}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:13, 21 March 2018

Reaction UDPGLUCEPIM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • UDP-glucose 4-epimerase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-α-D-glucose[c] <=> 1 UDP-α-D-galactose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7344, UDP-D-galactose biosynthesis: PWY-7344
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6397, mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: PWY-6397
    • 1 reactions found over 17 reactions in the full pathway
  • COLANSYN-PWY, colanic acid building blocks biosynthesis: COLANSYN-PWY
    • 6 reactions found over 11 reactions in the full pathway
  • PWY-6527, stachyose degradation: PWY-6527
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7328, superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: PWY-7328
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-3821, D-galactose degradation III: PWY-3821
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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