Difference between revisions of "PWY0-1261"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661 PWY-3661] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** palmitate biosynthesis I (animals and fungi)
+
** glycine betaine degradation I
 
* Synonym(s):
 
* Synonym(s):
−
** palmitic acid biosynthesis
 
−
** de novo lipogenesis
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''20''' reactions found over '''31''' reactions in the full pathway
+
  '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[4.2.1.58-RXN]]
+
* [[GLYOHMETRANS-RXN]]
−
** 0 associated gene:
+
** 2 associated gene(s):
 +
*** [[Ec-14_004260]]
 +
*** [[Ec-24_002640]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[4.2.1.61-RXN]]
+
* [[RXN-15124]]
 
** 0 associated gene:
 
** 0 associated gene:
−
** 1 reconstruction source(s) associated:
 
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 
−
* [[RXN-9514]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-01_007100]]
 
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[RXN-9515]]
+
* [[RXN-15127]]
 
** 0 associated gene:
 
** 0 associated gene:
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[RXN-9518]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-01_007100]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9524]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-01_007100]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9528]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-01_007100]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9532]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-01_007100]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9533]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 
−
* [[RXN-9536]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-01_007100]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9537]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 
−
* [[RXN-9540]]
 
−
** 1 associated gene(s):
 
−
*** [[Ec-01_007100]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9549]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 
−
* [[RXN-9648]]
 
−
** 4 associated gene(s):
 
−
*** [[Ec-27_003480]]
 
−
*** [[Ec-27_002090]]
 
−
*** [[Ec-12_000650]]
 
−
*** [[Ec-12_000640]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9650]]
 
−
** 4 associated gene(s):
 
−
*** [[Ec-27_003480]]
 
−
*** [[Ec-12_000640]]
 
−
*** [[Ec-27_002090]]
 
−
*** [[Ec-12_000650]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9651]]
 
−
** 4 associated gene(s):
 
−
*** [[Ec-27_002090]]
 
−
*** [[Ec-27_003480]]
 
−
*** [[Ec-12_000640]]
 
−
*** [[Ec-12_000650]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9652]]
 
−
** 4 associated gene(s):
 
−
*** [[Ec-12_000640]]
 
−
*** [[Ec-27_003480]]
 
−
*** [[Ec-27_002090]]
 
−
*** [[Ec-12_000650]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9653]]
 
−
** 4 associated gene(s):
 
−
*** [[Ec-12_000650]]
 
−
*** [[Ec-12_000640]]
 
−
*** [[Ec-27_002090]]
 
−
*** [[Ec-27_003480]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9654]]
 
−
** 4 associated gene(s):
 
−
*** [[Ec-12_000650]]
 
−
*** [[Ec-27_002090]]
 
−
*** [[Ec-12_000640]]
 
−
*** [[Ec-27_003480]]
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[annotation-esiliculosus_genome]]
 
−
* [[RXN-9655]]
 
−
** 0 associated gene:
 
−
** 1 reconstruction source(s) associated:
 
−
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=3.1.2.21-RXN 3.1.2.21-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.5-RXN 2.1.1.5-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.59-RXN 4.2.1.59-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=DIMETHYLGLYCINE-DEHYDROGENASE-RXN DIMETHYLGLYCINE-DEHYDROGENASE-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15125 RXN-15125]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9520 RXN-9520]
+
* [http://metacyc.org/META/NEW-IMAGE?object=SARCOX-RXN SARCOX-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9521 RXN-9521]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9526 RXN-9526]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9530 RXN-9530]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9534 RXN-9534]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9538 RXN-9538]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9542 RXN-9542]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-9780 RXN3O-9780]
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33154}}
+
{{#set: taxonomic range=TAX-2759}}
−
{{#set: common name=palmitate biosynthesis I (animals and fungi)}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: common name=palmitic acid biosynthesis|de novo lipogenesis}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: reaction found=20}}
+
{{#set: common name=glycine betaine degradation I}}
−
{{#set: total reaction=31}}
+
{{#set: reaction found=3}}
−
{{#set: completion rate=65.0}}
+
{{#set: total reaction=7}}
 +
{{#set: completion rate=43.0}}

Revision as of 14:14, 21 March 2018

Pathway PWY-3661

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY0-1261&oldid=16831"