Difference between revisions of "RXN-12567"

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(Created page with "Category:Gene == Gene Ec-27_004070 == * left end position: ** 3546837 * transcription direction: ** POSITIVE * right end position: ** 3548001 * centisome position: ** 54.9...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-580...")
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[[Category:Gene]]
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[[Category:Pathway]]
== Gene Ec-27_004070 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] ==
* left end position:
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* taxonomic range:
** 3546837
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
* transcription direction:
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* common name:
** POSITIVE
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** phenylpropanoid biosynthesis
* right end position:
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** 3548001
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* centisome position:
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** 54.990513   
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* Synonym(s):
 
* Synonym(s):
** Esi_0000_0441
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** monolignol biosynthesis
** Esi0000_0441
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** lignin biosynthesis
  
== Reactions associated ==
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== Reaction(s) found ==
* [[4OH2OXOGLUTARALDOL-RXN]]
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'''7''' reactions found over '''15''' reactions in the full pathway
** esiliculosus_genome
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* [[4-COUMARATE--COA-LIGASE-RXN]]
***automated-name-match
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** 2 associated gene(s):
* [[KDPGALDOL-RXN]]
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*** [[Ec-10_001480]]
** esiliculosus_genome
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*** [[Ec-04_001280]]
***automated-name-match
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** 1 reconstruction source(s) associated:
* [[RXN-13990]]
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*** [[orthology-aragem]]
** esiliculosus_genome
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* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
***automated-name-match
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** 1 associated gene(s):
== Pathways associated ==
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*** [[Ec-28_003750]]
* [[PWY-2221]]
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** 2 reconstruction source(s) associated:
* [[PWY-7310]]
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*** [[annotation-esiliculosus_genome]]
* [[PWY-6507]]
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*** [[orthology-aragem]]
* [[GALACTUROCAT-PWY]]
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* [[RXN-1101]]
* [[ENTNER-DOUDOROFF-PWY]]
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** 3 associated gene(s):
* [[PWY-7562]]
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*** [[Ec-12_005240]]
* [[HYDROXYPRODEG-PWY]]
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*** [[Ec-12_001350]]
* [[PWY-7242]]
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*** [[Ec-23_001220]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aragem]]
 +
* [[RXN-1102]]
 +
** 1 associated gene(s):
 +
*** [[Ec-18_002860]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aragem]]
 +
* [[RXN-1106]]
 +
** 3 associated gene(s):
 +
*** [[Ec-12_005240]]
 +
*** [[Ec-12_001350]]
 +
*** [[Ec-23_001220]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aragem]]
 +
* [[RXN-1125]]
 +
** 1 associated gene(s):
 +
*** [[Ec-18_002860]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aragem]]
 +
* [[RXN-1143]]
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** 1 associated gene(s):
 +
*** [[Ec-01_004720]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.36-RXN 1.14.13.36-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.133-RXN 2.3.1.133-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1142 RXN-1142]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2581 RXN-2581]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2601 RXN-2601]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2602 RXN-2602]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2621 RXN-2621]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2622 RXN-2622]
 
== External links  ==
 
== External links  ==
{{#set: left end position=3546837}}
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* ARACYC:
{{#set: transcription direction=POSITIVE}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-361 PWY-361]
{{#set: right end position=3548001}}
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{{#set: taxonomic range=TAX-58024}}
{{#set: centisome position=54.990513    }}
+
{{#set: common name=phenylpropanoid biosynthesis}}
{{#set: common name=Esi_0000_0441|Esi0000_0441}}
+
{{#set: common name=monolignol biosynthesis|lignin biosynthesis}}
{{#set: reaction associated=4OH2OXOGLUTARALDOL-RXN|KDPGALDOL-RXN|RXN-13990}}
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{{#set: reaction found=7}}
{{#set: pathway associated=PWY-2221|PWY-7310|PWY-6507|GALACTUROCAT-PWY|ENTNER-DOUDOROFF-PWY|PWY-7562|HYDROXYPRODEG-PWY|PWY-7242}}
+
{{#set: total reaction=15}}
 +
{{#set: completion rate=47.0}}

Revision as of 14:14, 21 March 2018

Pathway PWY-361

  • taxonomic range:
  • common name:
    • phenylpropanoid biosynthesis
  • Synonym(s):
    • monolignol biosynthesis
    • lignin biosynthesis

Reaction(s) found

7 reactions found over 15 reactions in the full pathway

Reaction(s) not found

External links