Difference between revisions of "CPD-19163"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ceramidase * ec n...")
(Created page with "Category:Gene == Gene Ec-01_008860 == * left end position: ** 7504688 * transcription direction: ** NEGATIVE * right end position: ** 7509507 * centisome position: ** 72.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDASE-RXN CERAMIDASE-RXN] ==
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== Gene Ec-01_008860 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 7504688
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* common name:
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* transcription direction:
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** Ceramidase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
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** 7509507
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* centisome position:
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** 72.72806   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0203_0009
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** Esi0203_0009
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** GATase1_DJ-1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[THIAZOLSYN3-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[N-Acylsphingosine]][c] '''=>''' 1 [[SPHINGOSINE]][c] '''+''' 1 [[Fatty-Acids]][c]
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* With common name(s):
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** 1 H2O[c] '''+''' 1 a (4E)-sphing-4-enine ceramide[c] '''=>''' 1 sphingosine[c] '''+''' 1 a fatty acid[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-26_006010]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY3DJ-11470]], sphingosine and sphingosine-1-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-11470 PWY3DJ-11470]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6897]]
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* [[PWY-7356]]
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* [[PWY-7357]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=7504688}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20856 20856]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=7509507}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01493 R01493]
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{{#set: centisome position=72.72806    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0203_0009|Esi0203_0009|GATase1_DJ-1}}
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{{#set: common name=Ceramidase}}
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{{#set: reaction associated=THIAZOLSYN3-RXN}}
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{{#set: ec number=EC-3.5.1.23}}
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{{#set: pathway associated=PWY-6897|PWY-7356|PWY-7357}}
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{{#set: gene associated=Ec-26_006010}}
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{{#set: in pathway=PWY3DJ-11470}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:15, 21 March 2018

Gene Ec-01_008860

  • left end position:
    • 7504688
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7509507
  • centisome position:
    • 72.72806
  • Synonym(s):
    • Esi_0203_0009
    • Esi0203_0009
    • GATase1_DJ-1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-19163&oldid=16997"