Difference between revisions of "CPD-714"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9725 RXN-9725] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] == * direction: ** REVERSIBLE * common name: ** Geranylgeranyl transferase type-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9725 RXN-9725] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Geranylgeranyl transferase type-2 subunit beta
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/1.3.1.77 EC-1.3.1.77]
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** [http://enzyme.expasy.org/EC/2.5.1.60 EC-2.5.1.60]
 +
** [http://enzyme.expasy.org/EC/2.5.1.59 EC-2.5.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 2 [[NADPH]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[CPD-591]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[CPD-7630]][c]
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** 1 [[PROT-CYS]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[S-GERANYLGERANYL-PROTEIN]][c]
 
* With common name(s):
 
* With common name(s):
** 2 NADPH[c] '''+''' 3 H+[c] '''+''' 1 cyanidin[c] '''=>''' 2 NADP+[c] '''+''' 1 (-)-epicatechin[c]
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** 1 a [protein]-L-cysteine[c] '''+''' 1 geranylgeranyl diphosphate[c] '''<=>''' 1 diphosphate[c] '''+''' 1 a [protein]-S-geranylgeranyl-L-cysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Ec-23_001220]]
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* Gene: [[Ec-27_003530]]
** [[pantograph]]-[[aragem]]
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** Source: [[annotation-esiliculosus_genome]]
* [[Ec-12_005240]]
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*** Assignment: EC-NUMBER
** [[pantograph]]-[[aragem]]
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* [[Ec-12_001350]]
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** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6035]], 2,3-cis-flavanols biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
+
* Category: [[annotation]]
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
*** Tool: [[pantograph]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=REVERSIBLE}}
** [http://www.genome.jp/dbget-bin/www_bget?R06542 R06542]
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{{#set: common name=Geranylgeranyl transferase type-2 subunit beta}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.5.1.60}}
{{#set: ec number=EC-1.3.1.77}}
+
{{#set: ec number=EC-2.5.1.59}}
{{#set: gene associated=Ec-23_001220|Ec-12_005240|Ec-12_001350}}
+
{{#set: gene associated=Ec-27_003530}}
{{#set: in pathway=PWY-6035}}
+
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:15, 21 March 2018

Reaction RXN-3701

  • direction:
    • REVERSIBLE
  • common name:
    • Geranylgeranyl transferase type-2 subunit beta
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links