Difference between revisions of "RXN-16150"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3.5....")
(Created page with "Category:Gene == Gene Ec-24_000340 == * left end position: ** 474586 * transcription direction: ** NEGATIVE * right end position: ** 481920 * centisome position: ** 9.5151...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] ==
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== Gene Ec-24_000340 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 474586
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.1.107 EC-3.5.1.107]
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** NEGATIVE
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* right end position:
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** 481920
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* centisome position:
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** 9.515180   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0398_0021
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** Esi0398_0021
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
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** 1 [[MALEAMATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[MALEATE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 maleamate[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 maleate[c]
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== Pathways associated ==
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* [[PWY-6164]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-26_006010]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-7128]], nicotine degradation III (VPP pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7128 PWY-7128]
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** '''1''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5033]], nicotinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5033 PWY-5033]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-722]], nicotinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-722 PWY-722]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=474586}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27385 27385]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=481920}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03540 R03540]
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{{#set: centisome position=9.515180    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0398_0021|Esi0398_0021}}
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{{#set: ec number=EC-3.5.1.107}}
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{{#set: reaction associated=3-DEHYDROQUINATE-SYNTHASE-RXN}}
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{{#set: gene associated=Ec-26_006010}}
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{{#set: pathway associated=PWY-6164}}
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{{#set: in pathway=PWY-6993|PWY-7128|PWY-5033|PWY-722}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 13:16, 21 March 2018

Gene Ec-24_000340

  • left end position:
    • 474586
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 481920
  • centisome position:
    • 9.515180
  • Synonym(s):
    • Esi_0398_0021
    • Esi0398_0021

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16150&oldid=17100"