Difference between revisions of "Cis-delta5-3-hydroxylignoceroyl-ACPs"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14389 RXN-14389] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] == * direction: ** REVERSIBLE * common name: ** Ureohydrolase * ec numbe...") |
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Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** REVERSIBLE |
+ | * common name: | ||
+ | ** Ureohydrolase | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/3.5.3.1 EC-3.5.3.1] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[WATER]][c] '''+''' 1 [[ARG]][c] '''<=>''' 1 [[UREA]][c] '''+''' 1 [[L-ORNITHINE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 H2O[c] '''+''' 1 L-arginine[c] '''<=>''' 1 urea[c] '''+''' 1 L-ornithine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Ec-10_001100]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Ec-22_003700]] | ||
+ | ** Source: [[orthology-aragem]] | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY] |
− | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
+ | * [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY] | ||
+ | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: in pathway=PWY- | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20569 20569] |
− | {{#set: reconstruction category=annotation}} | + | * LIGAND-RXN: |
− | {{#set: reconstruction source=annotation-esiliculosus_genome}} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00551 R00551] |
− | {{#set: reconstruction tool=pathwaytools}} | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P05089 P05089] | ||
+ | ** [http://www.uniprot.org/uniprot/P07824 P07824] | ||
+ | ** [http://www.uniprot.org/uniprot/P40906 P40906] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0Z3 Q7M0Z3] | ||
+ | ** [http://www.uniprot.org/uniprot/P14012 P14012] | ||
+ | ** [http://www.uniprot.org/uniprot/P37818 P37818] | ||
+ | ** [http://www.uniprot.org/uniprot/P49900 P49900] | ||
+ | ** [http://www.uniprot.org/uniprot/P39138 P39138] | ||
+ | ** [http://www.uniprot.org/uniprot/P53608 P53608] | ||
+ | ** [http://www.uniprot.org/uniprot/P72703 P72703] | ||
+ | ** [http://www.uniprot.org/uniprot/O68051 O68051] | ||
+ | ** [http://www.uniprot.org/uniprot/O49046 O49046] | ||
+ | ** [http://www.uniprot.org/uniprot/O76895 O76895] | ||
+ | ** [http://www.uniprot.org/uniprot/P33280 P33280] | ||
+ | ** [http://www.uniprot.org/uniprot/Q10066 Q10066] | ||
+ | ** [http://www.uniprot.org/uniprot/P00812 P00812] | ||
+ | {{#set: direction=REVERSIBLE}} | ||
+ | {{#set: common name=Ureohydrolase}} | ||
+ | {{#set: ec number=EC-3.5.3.1}} | ||
+ | {{#set: gene associated=Ec-10_001100|Ec-22_003700}} | ||
+ | {{#set: in pathway=ARGASEDEG-PWY|PWY-6922|ARG-PRO-PWY|ARG-GLU-PWY|PWY-4984|PWY-6305|CITRULBIO-PWY}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 13:16, 21 March 2018
Contents
Reaction ARGINASE-RXN
- direction:
- REVERSIBLE
- common name:
- Ureohydrolase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 ARG[c] <=> 1 UREA[c] + 1 L-ORNITHINE[c]
- With common name(s):
- 1 H2O[c] + 1 L-arginine[c] <=> 1 urea[c] + 1 L-ornithine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-10_001100
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
- Gene: Ec-22_003700
- Source: orthology-aragem
Pathways
- ARGASEDEG-PWY, L-arginine degradation I (arginase pathway): ARGASEDEG-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
- 6 reactions found over 7 reactions in the full pathway
- ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
- 4 reactions found over 4 reactions in the full pathway
- ARG-GLU-PWY, L-arginine degradation VII (arginase 3 pathway): ARG-GLU-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-4984, urea cycle: PWY-4984
- 5 reactions found over 5 reactions in the full pathway
- PWY-6305, putrescine biosynthesis IV: PWY-6305
- 3 reactions found over 4 reactions in the full pathway
- CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
- 8 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: