Difference between revisions of "Ec-13 001660"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
Line 1: Line 1:
 
[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] ==
 
* taxonomic range:
 
* taxonomic range:
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
 
* common name:
 
* common name:
−
** S-adenosyl-L-methionine cycle II
+
** formaldehyde assimilation II (RuMP Cycle)
 
* Synonym(s):
 
* Synonym(s):
−
** activated methyl cycle
+
** ribulose monophosphate cycle
−
** SAM cycle
+
** formaldehyde assimilation
 +
** RuMP pathway
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''3''' reactions found over '''4''' reactions in the full pathway
+
  '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[ADENOSYLHOMOCYSTEINASE-RXN]]
+
* [[1TRANSKETO-RXN]]
 
** 1 associated gene(s):
 
** 1 associated gene(s):
−
*** [[Ec-22_002610]]
+
*** [[Ec-20_002600]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[2TRANSKETO-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-20_002600]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[6PFRUCTPHOS-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Ec-14_003880]]
 +
*** [[Ec-22_000070]]
 +
*** [[Ec-12_002540]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[F16ALDOLASE-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Ec-10_004980]]
 +
*** [[Ec-01_008040]]
 +
*** [[Ec-10_000880]]
 +
*** [[Ec-14_001680]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[RIB5PISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-08_003540]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[HOMOCYSMET-RXN]]
+
* [[RIBULP3EPIM-RXN]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Ec-28_003190]]
+
*** [[Ec-07_002390]]
−
*** [[Ec-06_000970]]
+
*** [[Ec-27_003930]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[S-ADENMETSYN-RXN]]
+
* [[TRANSALDOL-RXN]]
−
** 1 associated gene(s):
+
** 2 associated gene(s):
−
*** [[Ec-06_008470]]
+
*** [[Ec-06_003940]]
 +
*** [[Ec-01_002780]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605]
+
* [http://metacyc.org/META/NEW-IMAGE?object=R10-RXN R10-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R12-RXN R12-RXN]
 
== External links  ==
 
== External links  ==
−
* ARACYC:
 
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5041 PWY-5041]
 
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: common name=formaldehyde assimilation II (RuMP Cycle)}}
−
{{#set: common name=S-adenosyl-L-methionine cycle II}}
+
{{#set: common name=ribulose monophosphate cycle|formaldehyde assimilation|RuMP pathway}}
−
{{#set: common name=activated methyl cycle|SAM cycle}}
+
{{#set: reaction found=7}}
−
{{#set: reaction found=3}}
+
{{#set: total reaction=9}}
−
{{#set: total reaction=4}}
+
{{#set: completion rate=78.0}}
−
{{#set: completion rate=75.0}}
+

Revision as of 13:16, 21 March 2018

Pathway PWY-1861

  • taxonomic range:
  • common name:
    • formaldehyde assimilation II (RuMP Cycle)
  • Synonym(s):
    • ribulose monophosphate cycle
    • formaldehyde assimilation
    • RuMP pathway

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-13_001660&oldid=17147"