Difference between revisions of "CPD-18379"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12623 RXN-12623] == * direction: ** LEFT-TO-RIGHT * common name: ** N,N'-diacetylchitobiose syn...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] == * direction: ** REVERSIBLE * common nam...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12623 RXN-12623] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLACYLYLCOA-HYDROXY-RXN METHYLACYLYLCOA-HYDROXY-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** N,N'-diacetylchitobiose synthase
+
** Methylacrylyl-CoA hydratase
−
** chitinase-domain containing protein
+
** ClpP/crotonase-like domain
 +
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
 +
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.14 EC-3.2.1.14]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
−
** endolytic chitodextrinase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Chitodextrins]][c] '''=>''' n [[CHITOBIOSE]][c]
+
** 1 [[CPD-12173]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[METHACRYLYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a chitodextrin[c] '''=>''' n N,N'-diacetylchitobiose[c]
+
** 1 (S)-3-hydroxy-isobutanoyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 methylacrylyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-05_006850]]
+
* Gene: [[Ec-16_001250]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-17_000320]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-06_001380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_003560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6902]], chitin degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6902 PWY-6902]
+
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=N,N'-diacetylchitobiose synthase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31175 31175]
−
{{#set: common name=chitinase-domain containing protein}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-3.2.1.14}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224]
−
{{#set: common name=endolytic chitodextrinase}}
+
* UNIPROT:
−
{{#set: gene associated=Ec-05_006850}}
+
** [http://www.uniprot.org/uniprot/P21177 P21177]
−
{{#set: in pathway=PWY-6902}}
+
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/O29814 O29814]
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
** [http://www.uniprot.org/uniprot/O29299 O29299]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/O34893 O34893]
 +
** [http://www.uniprot.org/uniprot/O23520 O23520]
 +
** [http://www.uniprot.org/uniprot/P76082 P76082]
 +
** [http://www.uniprot.org/uniprot/P64016 P64016]
 +
** [http://www.uniprot.org/uniprot/P07896 P07896]
 +
** [http://www.uniprot.org/uniprot/O53419 O53419]
 +
** [http://www.uniprot.org/uniprot/P94549 P94549]
 +
** [http://www.uniprot.org/uniprot/Q13825 Q13825]
 +
** [http://www.uniprot.org/uniprot/P45361 P45361]
 +
** [http://www.uniprot.org/uniprot/P28793 P28793]
 +
** [http://www.uniprot.org/uniprot/P14604 P14604]
 +
** [http://www.uniprot.org/uniprot/P22414 P22414]
 +
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
 +
** [http://www.uniprot.org/uniprot/P34559 P34559]
 +
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
 +
** [http://www.uniprot.org/uniprot/P55100 P55100]
 +
** [http://www.uniprot.org/uniprot/P53526 P53526]
 +
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 +
** [http://www.uniprot.org/uniprot/O52797 O52797]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Methylacrylyl-CoA hydratase}}
 +
{{#set: common name=ClpP/crotonase-like domain}}
 +
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
 +
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
 +
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Ec-16_001250|Ec-14_006530|Ec-17_000320|Ec-06_001380|Ec-16_003560}}
 +
{{#set: in pathway=VALDEG-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:17, 21 March 2018

Reaction METHYLACYLYLCOA-HYDROXY-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Methylacrylyl-CoA hydratase
    • ClpP/crotonase-like domain
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxy-isobutanoyl-CoA[c] <=> 1 H2O[c] + 1 methylacrylyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-18379&oldid=17242"