Difference between revisions of "Carboxylic-esters"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUC1PURIDYLTRANS-RXN GLUC1PURIDYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** UTP--g...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUC1PURIDYLTRANS-RXN GLUC1PURIDYLTRANS-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Rubisco shunt
+
** UTP--glucose-1-phosphate uridylyltransferase family
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.7.64 EC-2.7.7.64]
 +
** [http://enzyme.expasy.org/EC/2.7.7.9 EC-2.7.7.9]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''10''' reactions found over '''10''' reactions in the full pathway
+
* With identifiers:
−
* [[1TRANSKETO-RXN]]
+
** 1 [[UTP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLC-1-P]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-12575]][c]
−
** 1 associated gene(s):
+
* With common name(s):
−
*** [[Ec-20_002600]]
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** 1 UTP[c] '''+''' 1 H+[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c] '''<=>''' 1 diphosphate[c] '''+''' 1 UDP-&alpha;-D-glucose[c]
−
** 2 reconstruction source(s) associated:
+
 
−
*** [[annotation-esiliculosus_genome]]
+
== Genes associated with this reaction  ==
−
*** [[orthology-aragem]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[2PGADEHYDRAT-RXN]]
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* Gene: [[Ec-03_002030]]
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** 3 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-27_004000]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** [[Ec-26_004120]]
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* Gene: [[Ec-12_002300]]
−
*** [[Ec-14_005400]]
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** Source: [[orthology-aragem]]
−
** 2 reconstruction source(s) associated:
+
* Gene: [[Ec-16_004100]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[2TRANSKETO-RXN]]
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* Gene: [[Ec-05_002180]]
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** 1 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-20_002600]]
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*** Assignment: AUTOMATED-NAME-MATCH
−
** 2 reconstruction source(s) associated:
+
== Pathways  ==
−
*** [[annotation-esiliculosus_genome]]
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* [[PWY-7343]], UDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7343 PWY-7343]
−
*** [[orthology-aragem]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[3PGAREARR-RXN]]
+
* [[PWY-3801]], sucrose degradation II (sucrose synthase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3801 PWY-3801]
−
** 7 associated gene(s):
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
*** [[Ec-24_002670]]
+
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
−
*** [[Ec-03_002170]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
−
*** [[Ec-27_000330]]
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* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
−
*** [[Ec-03_002160]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
−
*** [[Ec-01_000980]]
+
== Reconstruction information  ==
−
*** [[Ec-06_009930]]
+
* Category: [[orthology]]
−
*** [[Ec-10_005410]]
+
** Source: [[orthology-aragem]]
−
** 2 reconstruction source(s) associated:
+
*** Tool: [[pantograph]]
−
*** [[annotation-esiliculosus_genome]]
+
* Category: [[annotation]]
−
*** [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[PEPDEPHOS-RXN]]
+
*** Tool: [[pathwaytools]]
−
** 3 associated gene(s):
+
−
*** [[Ec-26_004170]]
+
−
*** [[Ec-12_000950]]
+
−
*** [[Ec-06_006860]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[PHOSPHORIBULOKINASE-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Ec-26_002450]]
+
−
*** [[Ec-27_003910]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[RIB5PISOM-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-08_003540]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-12_007560]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[RIBULP3EPIM-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Ec-07_002390]]
+
−
*** [[Ec-27_003930]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[TRANSALDOL-RXN]]
+
−
** 2 associated gene(s):
+
−
*** [[Ec-01_002780]]
+
−
*** [[Ec-06_003940]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
== Reaction(s) not found ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-58024}}
+
* RHEA:
−
{{#set: common name=Rubisco shunt}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19889 19889]
−
{{#set: reaction found=10}}
+
* PIR:
−
{{#set: total reaction=10}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A40650 A40650]
−
{{#set: completion rate=100.0}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41382 A41382]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56146 A56146]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64250 A64250]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64970 A64970]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A75096 A75096]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D49349 D49349]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D69184 D69184]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70601 D70601]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E64466 E64466]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E71913 E71913]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F59102 F59102]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64600 F64600]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F81300 F81300]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64095 G64095]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G70125 G70125]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70446 H70446]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC2265 JC2265]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4785 JC4785]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4985 JC4985]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0277 JX0277]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S15298 S15298]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S30007 S30007]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S31431 S31431]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S35692 S35692]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41533 S41533]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62599 S62599]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S73501 S73501]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78541 S78541]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T42521 T42521]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44841 T44841]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45453 T45453]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNDOU XNDOU]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNPOU XNPOU]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00289 R00289]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q05852 Q05852]
 +
** [http://www.uniprot.org/uniprot/P27897 P27897]
 +
** [http://www.uniprot.org/uniprot/Q48447 Q48447]
 +
** [http://www.uniprot.org/uniprot/P47691 P47691]
 +
** [http://www.uniprot.org/uniprot/P0AAB6 P0AAB6]
 +
** [http://www.uniprot.org/uniprot/Q9UZI7 Q9UZI7]
 +
** [http://www.uniprot.org/uniprot/P33696 P33696]
 +
** [http://www.uniprot.org/uniprot/O26731 O26731]
 +
** [http://www.uniprot.org/uniprot/O05576 O05576]
 +
** [http://www.uniprot.org/uniprot/Q58730 Q58730]
 +
** [http://www.uniprot.org/uniprot/Q9ZLI8 Q9ZLI8]
 +
** [http://www.uniprot.org/uniprot/Q9X364 Q9X364]
 +
** [http://www.uniprot.org/uniprot/O25363 O25363]
 +
** [http://www.uniprot.org/uniprot/Q9PMD3 Q9PMD3]
 +
** [http://www.uniprot.org/uniprot/P44878 P44878]
 +
** [http://www.uniprot.org/uniprot/O51225 O51225]
 +
** [http://www.uniprot.org/uniprot/O67602 O67602]
 +
** [http://www.uniprot.org/uniprot/P0AEP3 P0AEP3]
 +
** [http://www.uniprot.org/uniprot/Q43772 Q43772]
 +
** [http://www.uniprot.org/uniprot/P74969 P74969]
 +
** [http://www.uniprot.org/uniprot/Q07130 Q07130]
 +
** [http://www.uniprot.org/uniprot/P32861 P32861]
 +
** [http://www.uniprot.org/uniprot/P19595 P19595]
 +
** [http://www.uniprot.org/uniprot/Q07131 Q07131]
 +
** [http://www.uniprot.org/uniprot/P37776 P37776]
 +
** [http://www.uniprot.org/uniprot/P75124 P75124]
 +
** [http://www.uniprot.org/uniprot/Q46768 Q46768]
 +
** [http://www.uniprot.org/uniprot/P78811 P78811]
 +
** [http://www.uniprot.org/uniprot/Q9RMC3 Q9RMC3]
 +
** [http://www.uniprot.org/uniprot/Q9Z5G1 Q9Z5G1]
 +
** [http://www.uniprot.org/uniprot/P08800 P08800]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=UTP--glucose-1-phosphate uridylyltransferase family}}
 +
{{#set: ec number=EC-2.7.7.64}}
 +
{{#set: ec number=EC-2.7.7.9}}
 +
{{#set: gene associated=Ec-03_002030|Ec-12_002300|Ec-16_004100|Ec-05_002180}}
 +
{{#set: in pathway=PWY-7343|PWY-3801|PWY-6527|PWY-7238}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:17, 21 March 2018

Reaction GLUC1PURIDYLTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • UTP--glucose-1-phosphate uridylyltransferase family
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UTP[c] + 1 H+[c] + 1 α-D-glucopyranose 1-phosphate[c] <=> 1 diphosphate[c] + 1 UDP-α-D-glucose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7343, UDP-glucose biosynthesis: PWY-7343
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-3801, sucrose degradation II (sucrose synthase): PWY-3801
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6527, stachyose degradation: PWY-6527
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II: PWY-7238
    • 4 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Carboxylic-esters&oldid=17251"