Difference between revisions of "Ec-06 010130"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-RXN ACETATE--COA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
(Created page with "Category:Gene == Gene Ec-01_011040 == * left end position: ** 9234560 * transcription direction: ** NEGATIVE * right end position: ** 9242601 * centisome position: ** 89.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-RXN ACETATE--COA-LIGASE-RXN] ==
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== Gene Ec-01_011040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 9234560
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* common name:
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* transcription direction:
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** Acetate-CoA ligase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.2.1.1 EC-6.2.1.1]
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** 9242601
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* centisome position:
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** 89.49228   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0008_0209
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** Esi0008_0209
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** AOAT1, GGAT1, GG
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ALANINE-AMINOTRANSFERASE-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[ACET]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[ACETYL-COA]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 coenzyme A[c] '''+''' 1 acetate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 acetyl-CoA[c]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[D-ALANINE-AMINOTRANSFERASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-21_006210]]
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*** Assignment: go-term
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-13698]]
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***EC-NUMBER
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== Pathways  ==
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* [[PWY66-161]], oxidative ethanol degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-161 PWY66-161]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-21]], ethanol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-21 PWY66-21]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-162]], ethanol degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-162 PWY66-162]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1313]], acetate conversion to acetyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1313 PWY0-1313]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[ALANINE-DEG3-PWY]]
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* [[PWY-7383]]
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* [[PWY-7117]]
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* [[ALACAT2-PWY]]
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* [[PWY-7115]]
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* [[ALANINE-SYN2-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=9234560}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=9242601}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
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{{#set: centisome position=89.49228    }}
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* UNIPROT:
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{{#set: common name=Esi_0008_0209|Esi0008_0209|AOAT1, GGAT1, GG}}
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** [http://www.uniprot.org/uniprot/P27095 P27095]
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{{#set: reaction associated=ALANINE-AMINOTRANSFERASE-RXN|D-ALANINE-AMINOTRANSFERASE-RXN|RXN-13698}}
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** [http://www.uniprot.org/uniprot/P31638 P31638]
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{{#set: pathway associated=ALANINE-DEG3-PWY|PWY-7383|PWY-7117|ALACAT2-PWY|PWY-7115|ALANINE-SYN2-PWY}}
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** [http://www.uniprot.org/uniprot/Q12662 Q12662]
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** [http://www.uniprot.org/uniprot/P28812 P28812]
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** [http://www.uniprot.org/uniprot/P27550 P27550]
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** [http://www.uniprot.org/uniprot/O34613 O34613]
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** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
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** [http://www.uniprot.org/uniprot/P36333 P36333]
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** [http://www.uniprot.org/uniprot/Q01574 Q01574]
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** [http://www.uniprot.org/uniprot/P39062 P39062]
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** [http://www.uniprot.org/uniprot/Q01576 Q01576]
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** [http://www.uniprot.org/uniprot/P52910 P52910]
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** [http://www.uniprot.org/uniprot/Q55404 Q55404]
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** [http://www.uniprot.org/uniprot/P16928 P16928]
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** [http://www.uniprot.org/uniprot/P16929 P16929]
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** [http://www.uniprot.org/uniprot/O68040 O68040]
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** [http://www.uniprot.org/uniprot/P78773 P78773]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Acetate-CoA ligase}}
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{{#set: ec number=EC-6.2.1.1}}
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{{#set: gene associated=Ec-21_006210}}
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{{#set: in pathway=PWY66-161|PWY66-21|PWY66-162|PWY0-1313|PWY-6672|PWY-7118}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:17, 21 March 2018

Gene Ec-01_011040

  • left end position:
    • 9234560
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 9242601
  • centisome position:
    • 89.49228
  • Synonym(s):
    • Esi_0008_0209
    • Esi0008_0209
    • AOAT1, GGAT1, GG

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_010130&oldid=17261"