Difference between revisions of "PWY-5653"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.5-RXN 1.3.99.5-RXN] == * direction: ** REVERSIBLE * common name: ** 3-oxo-5-alpha-steroid 4-...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5782 TAX-57...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.3.99.5-RXN 1.3.99.5-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5782 TAX-5782]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-10239 TAX-10239]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* common name:
 
* common name:
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** 3-oxo-5-alpha-steroid 4-dehydrogenase
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** pyrimidine deoxyribonucleotides de novo biosynthesis III
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.1.22 EC-1.3.1.22]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''9''' reactions in the full pathway
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** 1 [[3-Oxo-5-Alpha-Steroids]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-Oxo-Delta-4-Steroids]][c]
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* [[CDPREDUCT-RXN]]
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* With common name(s):
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** 7 associated gene(s):
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** 1 a 3-oxo-5-&alpha;-steroid[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-&Delta;4-steroid[c]
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*** [[Ec-19_000440]]
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*** [[Ec-06_005120]]
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== Genes associated with this reaction  ==
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*** [[Ec-06_005570]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-21_002920]]
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* [[Ec-02_006180]]
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*** [[Ec-17_003700]]
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** ESILICULOSUS_GENOME
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*** [[Ec-11_002170]]
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***GO-TERM
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*** [[Ec-11_002180]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[DCDPKIN-RXN]]
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*** Tool: [[pathwaytools]]
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** 7 associated gene(s):
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*** [[Ec-03_001380]]
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*** [[Ec-11_005170]]
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*** [[Ec-26_003930]]
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*** [[Ec-22_003280]]
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*** [[Ec-07_000140]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-26_003930]]
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*** [[Ec-07_000140]]
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*** [[Ec-03_001380]]
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*** [[Ec-22_003280]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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*** [[Ec-11_005170]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
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*** [[Ec-20_004950]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[DUDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-22_003280]]
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*** [[Ec-04_001140]]
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*** [[Ec-07_000140]]
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*** [[Ec-26_003930]]
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*** [[Ec-03_001380]]
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*** [[Ec-11_005170]]
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*** [[Ec-11_004330]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DUTP-PYROP-RXN]]
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** 1 associated gene(s):
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*** [[Ec-13_002810]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-12195]]
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** 9 associated gene(s):
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*** [[Ec-05_005340]]
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*** [[Ec-03_004860]]
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*** [[Ec-02_005730]]
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*** [[Ec-17_000870]]
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*** [[Ec-18_004660]]
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*** [[Ec-28_000420]]
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*** [[Ec-03_001180]]
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*** [[Ec-01_003690]]
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*** [[Ec-06_005470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[UDPREDUCT-RXN]]
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** 7 associated gene(s):
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*** [[Ec-06_005120]]
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*** [[Ec-21_002920]]
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*** [[Ec-06_005570]]
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*** [[Ec-11_002180]]
 +
*** [[Ec-17_003700]]
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*** [[Ec-11_002170]]
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*** [[Ec-19_000440]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8850 RXN-8850]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIGAND-MAP:
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** [http://www.genome.jp/dbget-bin/www_bget?R02643 R02643]
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** [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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* UNIPROT:
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{{#set: taxonomic range=TAX-5782}}
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** [http://www.uniprot.org/uniprot/P18405 P18405]
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{{#set: taxonomic range=TAX-10239}}
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** [http://www.uniprot.org/uniprot/Q59327 Q59327]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=3-oxo-5-alpha-steroid 4-dehydrogenase}}
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{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis III}}
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{{#set: ec number=EC-1.3.1.22}}
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{{#set: reaction found=8}}
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{{#set: gene associated=Ec-02_006180}}
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{{#set: total reaction=9}}
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{{#set: in pathway=}}
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{{#set: completion rate=89.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:18, 21 March 2018

Pathway PWY-6545

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5653&oldid=17400"