Difference between revisions of "PWY-3821"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** pyruvate fermentation to hexanol (engineered)
+
** (5Z)-dodec-5-enoate biosynthesis
 
* Synonym(s):
 
* Synonym(s):
 +
** (5Z)-dodecenoate biosynthesis
 +
** cis-dodecenoate biosynthesis
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''7''' reactions found over '''11''' reactions in the full pathway
+
  '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
+
* [[5.3.3.14-RXN]]
−
** 3 associated gene(s):
+
** 0 associated gene:
−
*** [[Ec-26_003940]]
+
−
*** [[Ec-24_000870]]
+
−
*** [[Ec-22_002850]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[PYRUFLAVREDUCT-RXN]]
+
−
** 3 associated gene(s):
+
−
*** [[Ec-23_002710]]
+
−
*** [[Ec-15_004230]]
+
−
*** [[Ec-18_003420]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
−
*** [[annotation-esiliculosus_genome]]
+
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
* [[RXN-11662]]
+
* [[RXN-9655]]
−
** 2 associated gene(s):
+
** 0 associated gene:
−
*** [[Ec-19_005290]]
+
−
*** [[Ec-14_006530]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[RXN-11667]]
+
−
** 2 associated gene(s):
+
−
*** [[Ec-17_000320]]
+
−
*** [[Ec-14_006530]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
+
−
* [[RXN-12565]]
+
−
** 2 associated gene(s):
+
−
*** [[Ec-22_002850]]
+
−
*** [[Ec-26_003940]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
−
*** [[orthology-aragem]]
+
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
* [[RXN-12567]]
+
* [[RXN0-2141]]
 
** 4 associated gene(s):
 
** 4 associated gene(s):
−
*** [[Ec-06_001380]]
+
*** [[Ec-27_003480]]
−
*** [[Ec-16_001250]]
+
*** [[Ec-27_002090]]
−
*** [[Ec-16_003560]]
+
*** [[Ec-12_000640]]
−
*** [[Ec-14_006530]]
+
*** [[Ec-12_000650]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[RXN-12570]]
+
* [[RXN0-2142]]
−
** 2 associated gene(s):
+
** 1 associated gene(s):
−
*** [[Ec-19_005290]]
+
*** [[Ec-01_007100]]
−
*** [[Ec-14_006530]]
+
** 1 reconstruction source(s) associated:
−
** 2 reconstruction source(s) associated:
+
*** [[annotation-esiliculosus_genome]]
 +
* [[RXN0-2144]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[RXN0-2145]]
 +
** 1 associated gene(s):
 +
*** [[Ec-27_002470]]
 +
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
 
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=HEXANOL-RXN HEXANOL-RXN]
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12558 RXN-12558]
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12559 RXN-12559]
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12568 RXN-12568]
 
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
* ECOCYC:
 +
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-862 PWY0-862]
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=pyruvate fermentation to hexanol (engineered)}}
+
{{#set: common name=(5Z)-dodec-5-enoate biosynthesis}}
−
{{#set: reaction found=7}}
+
{{#set: common name=(5Z)-dodecenoate biosynthesis|cis-dodecenoate biosynthesis}}
−
{{#set: total reaction=11}}
+
{{#set: reaction found=6}}
−
{{#set: completion rate=64.0}}
+
{{#set: total reaction=6}}
 +
{{#set: completion rate=100.0}}

Revision as of 13:18, 21 March 2018

Pathway PWY0-862

  • taxonomic range:
  • common name:
    • (5Z)-dodec-5-enoate biosynthesis
  • Synonym(s):
    • (5Z)-dodecenoate biosynthesis
    • cis-dodecenoate biosynthesis

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-3821&oldid=17423"