Difference between revisions of "RXN-1143"

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(Created page with "Category:Gene == Gene Ec-09_000120 == * left end position: ** 112155 * transcription direction: ** NEGATIVE * right end position: ** 123666 * centisome position: ** 1.9980...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phytanoyl-CoA dio...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-09_000120 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.18-RXN 1.14.11.18-RXN] ==
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* left end position:
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* direction:
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** 112155
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Phytanoyl-CoA dioxygenase
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* right end position:
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* ec number:
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** 123666
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** [http://enzyme.expasy.org/EC/1.14.11.18 EC-1.14.11.18]
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* centisome position:
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** 1.9980721   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0215_0020
 
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** Esi0215_0020
 
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** FTSZ
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN0-5462]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[CPD-206]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[2-HYDROXYPHYTANOYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 phytanoyl-CoA[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 2-hydroxyphytanoyl-CoA[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-22_003660]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_011990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001740]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-23_003040]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=112155}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16065 16065]
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{{#set: right end position=123666}}
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* LIGAND-RXN:
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{{#set: centisome position=1.9980721    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05722 R05722]
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{{#set: common name=Esi_0215_0020|Esi0215_0020|FTSZ}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN0-5462}}
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{{#set: common name=Phytanoyl-CoA dioxygenase}}
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{{#set: ec number=EC-1.14.11.18}}
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{{#set: gene associated=Ec-22_003660|Ec-01_011990|Ec-01_001740|Ec-23_003040}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:18, 21 March 2018

Reaction 1.14.11.18-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phytanoyl-CoA dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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