Difference between revisions of "Ec-10 001310"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-containing-5Me-uridine54 tRNA-containing-5Me-uridine54] == * common name: ** a 5-methylura...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranylgeranyl reductase * Sy...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-containing-5Me-uridine54 tRNA-containing-5Me-uridine54] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a 5-methyluracil54 in tRNA
+
** Geranylgeranyl reductase
 
* Synonym(s):
 
* Synonym(s):
−
** a tRNA containing 5-methyluracil54
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[TRNA-URACIL-5--METHYLTRANSFERASE-RXN]]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-7003]][c] '''=>''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[NADP]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 tetrahydrogeranylgeranyl diphosphate[c] '''=>''' 1 phytyl diphosphate[c] '''+''' 1 NADP+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-03_003520]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a 5-methyluracil54 in tRNA}}
+
* LIGAND-RXN:
−
{{#set: common name=a tRNA containing 5-methyluracil54}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756]
−
{{#set: produced by=TRNA-URACIL-5--METHYLTRANSFERASE-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Geranylgeranyl reductase}}
 +
{{#set: gene associated=Ec-03_003520}}
 +
{{#set: in pathway=PWY-5063}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:19, 21 March 2018

Reaction RXN-7660

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Geranylgeranyl reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADPH[c] + 1 tetrahydrogeranylgeranyl diphosphate[c] => 1 phytyl diphosphate[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_001310&oldid=17560"