Difference between revisions of "TRNAs-with-queuine"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2.1...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18350 CPD-18350] == * smiles: ** CCCCCCCCCCCCCCCC(OCC(OC(=O)CCCCCCCC=CCCCCCC)COP([O-])(=O)[...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18350 CPD-18350] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CCCCCCCCCCCCCCCC(OCC(OC(=O)CCCCCCCC=CCCCCCC)COP([O-])(=O)[O-])=O
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/1.2.1.8 EC-1.2.1.8]
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** InChIKey=SCNLPRDASXIFJK-IQULNDIKSA-L
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* common name:
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** 1-palmitoyl-2-palmitoleoyl phosphatidate
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* molecular weight:
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** 644.867   
 
* Synonym(s):
 
* Synonym(s):
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** 16:0-16:1-PA
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** 1-hexadecanoyl-2-(9Z-hexadecenoyl)-sn-glycerol-3-phosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 1 [[BETAINE]][c] '''+''' 1 [[NADH]][c]
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* [[RXN-17008]]
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* With common name(s):
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* [[RXN-17012]]
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** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 betaine aldehyde[c] '''<=>''' 2 H+[c] '''+''' 1 glycine betaine[c] '''+''' 1 NADH[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-20_003790]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-3722]], glycine betaine biosynthesis II (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3722 PWY-3722]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY1F-353]], glycine betaine biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7494]], choline degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: smiles=CCCCCCCCCCCCCCCC(OCC(OC(=O)CCCCCCCC=CCCCCCC)COP([O-])(=O)[O-])=O}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30070 30070]
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{{#set: inchi key=InChIKey=SCNLPRDASXIFJK-IQULNDIKSA-L}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15305 15305]
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{{#set: common name=1-palmitoyl-2-palmitoleoyl phosphatidate}}
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* LIGAND-RXN:
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{{#set: molecular weight=644.867    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02565 R02565]
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{{#set: common name=16:0-16:1-PA|1-hexadecanoyl-2-(9Z-hexadecenoyl)-sn-glycerol-3-phosphate}}
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* UNIPROT:
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{{#set: produced by=RXN-17008|RXN-17012}}
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** [http://www.uniprot.org/uniprot/P17202 P17202]
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** [http://www.uniprot.org/uniprot/P17445 P17445]
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** [http://www.uniprot.org/uniprot/P28237 P28237]
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** [http://www.uniprot.org/uniprot/P42757 P42757]
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** [http://www.uniprot.org/uniprot/Q40024 Q40024]
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** [http://www.uniprot.org/uniprot/O24174 O24174]
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** [http://www.uniprot.org/uniprot/Q43828 Q43828]
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** [http://www.uniprot.org/uniprot/Q43829 Q43829]
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** [http://www.uniprot.org/uniprot/O22477 O22477]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.2.1.8}}
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{{#set: gene associated=Ec-20_003790}}
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{{#set: in pathway=BETSYN-PWY|CHOLINE-BETAINE-ANA-PWY|PWY-3722|PWY1F-353|PWY-7494}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 13:19, 21 March 2018

Metabolite CPD-18350

  • smiles:
    • CCCCCCCCCCCCCCCC(OCC(OC(=O)CCCCCCCC=CCCCCCC)COP([O-])(=O)[O-])=O
  • inchi key:
    • InChIKey=SCNLPRDASXIFJK-IQULNDIKSA-L
  • common name:
    • 1-palmitoyl-2-palmitoleoyl phosphatidate
  • molecular weight:
    • 644.867
  • Synonym(s):
    • 16:0-16:1-PA
    • 1-hexadecanoyl-2-(9Z-hexadecenoyl)-sn-glycerol-3-phosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCCCCCCCCC(OCC(OC(=O)CCCCCCCC=CCCCCCC)COP([O-])(=O)[O-])=O" cannot be used as a page name in this wiki.



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