Difference between revisions of "RXN-16380"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoenol...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TA...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** phosphoenolpyruvate carboxykinase (ATP)
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** N10-formyl-tetrahydrofolate biosynthesis
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
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* Synonym(s):
 
* Synonym(s):
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** N10-formyl-THF biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''9''' reactions in the full pathway
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** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[1.5.1.20-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 oxaloacetate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 CO2[c]
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*** [[Ec-03_002180]]
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*** [[Ec-08_003880]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-19_002930]]
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* [[5-FORMYL-THF-CYCLO-LIGASE-RXN]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***GO-TERM
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*** [[Ec-01_009140]]
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** [[pantograph]]-[[aragem]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
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* [[DIHYDROFOLATEREDUCT-RXN]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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** 4 associated gene(s):
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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*** [[Ec-15_001370]]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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*** [[Ec-07_007470]]
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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*** [[Ec-27_004630]]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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*** [[Ec-14_004070]]
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== Reconstruction information  ==
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** 1 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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* [[GCVMULTI-RXN]]
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*** Tool: [[pantograph]]
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** 0 associated gene:
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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* [[GLYOHMETRANS-RXN]]
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** 2 associated gene(s):
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*** [[Ec-14_004260]]
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*** [[Ec-24_002640]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[HOMOCYSMETB12-RXN]]
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** 2 associated gene(s):
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*** [[Ec-06_000970]]
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*** [[Ec-06_000980]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[METHENYLTHFCYCLOHYDRO-RXN]]
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** 2 associated gene(s):
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*** [[Ec-14_004070]]
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*** [[Ec-15_001370]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[METHYLENETHFDEHYDROG-NADP-RXN]]
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** 3 associated gene(s):
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*** [[Ec-15_001370]]
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*** [[Ec-14_004070]]
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*** [[Ec-07_007470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[THYMIDYLATESYN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-27_004630]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
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{{#set: taxonomic range=TAX-33208}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P10963 P10963]
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{{#set: common name=N10-formyl-tetrahydrofolate biosynthesis}}
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** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
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{{#set: common name=N10-formyl-THF biosynthesis}}
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** [http://www.uniprot.org/uniprot/P43923 P43923]
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{{#set: reaction found=9}}
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** [http://www.uniprot.org/uniprot/P22259 P22259]
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{{#set: total reaction=9}}
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** [http://www.uniprot.org/uniprot/P42066 P42066]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P49292 P49292]
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** [http://www.uniprot.org/uniprot/O49547 O49547]
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** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
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** [http://www.uniprot.org/uniprot/Q39294 Q39294]
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** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoenolpyruvate carboxykinase (ATP)}}
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{{#set: ec number=EC-4.1.1.49}}
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{{#set: gene associated=Ec-19_002930}}
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{{#set: in pathway=PWY-561|PWY-7117|GLUCONEO-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:20, 21 March 2018

Pathway 1CMET2-PWY

  • taxonomic range:
  • common name:
    • N10-formyl-tetrahydrofolate biosynthesis
  • Synonym(s):
    • N10-formyl-THF biosynthesis

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links





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