Difference between revisions of "PWY-1622"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-...")
(Created page with "Category:Gene == Gene Ec-24_003910 == * left end position: ** 4284830 * transcription direction: ** POSITIVE * right end position: ** 4292393 * centisome position: ** 85.9...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] ==
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== Gene Ec-24_003910 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
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** 4284830
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* common name:
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* transcription direction:
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** reductive TCA cycle II
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** POSITIVE
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* right end position:
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** 4292393
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* centisome position:
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** 85.90842   
 
* Synonym(s):
 
* Synonym(s):
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** reductive tricarboxylic acid cycle
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** Esi_0109_0085
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** reductive tricarboxylic acid pathway
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** Esi0109_0085
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** reductive citric acid cycle
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** reverse citric acid cycle
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** carbon fixation
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** CO2 fixation
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** reductive carboxylic acid cycle
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== Reaction(s) found ==
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== Reactions associated ==
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'''6''' reactions found over '''12''' reactions in the full pathway
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* Reaction: [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
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* [[ACONITATEDEHYDR-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: automated-name-match
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*** [[Ec-16_001000]]
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* Reaction: [[GPPSYN-RXN]]
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*** [[Ec-12_000170]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: go-term
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*** [[annotation-esiliculosus_genome]]
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* Reaction: [[RXN-9003]]
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* [[ACONITATEHYDR-RXN]]
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** Source: [[orthology-aragem]]
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** 2 associated gene(s):
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* Reaction: [[RXN-9384]]
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*** [[Ec-12_000170]]
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** Source: [[orthology-aragem]]
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*** [[Ec-16_001000]]
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* Reaction: [[RXN0-5180]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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== Pathways associated ==
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* [[FUMHYDR-RXN]]
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* [[PWY-7736]]
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** 2 associated gene(s):
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* [[PWY-7410]]
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*** [[Ec-23_003460]]
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* [[PWY-6859]]
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*** [[Ec-25_001360]]
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* [[PWY-7709]]
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** 2 reconstruction source(s) associated:
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* [[PWY-6383]]
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-7235]]
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*** [[orthology-aragem]]
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* [[PWY-7182]]
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* [[MALATE-DEH-RXN]]
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* [[PWY-6708]]
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** 2 associated gene(s):
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* [[PWY-7141]]
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*** [[Ec-10_006200]]
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* [[PWY-5123]]
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*** [[Ec-02_003100]]
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* [[PWY-5122]]
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** 2 reconstruction source(s) associated:
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* [[PWY-7102]]
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-7659]]
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*** [[orthology-aragem]]
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* [[PWY-5870]]
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* [[PYRUFLAVREDUCT-RXN]]
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* [[PWY3O-19]]
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** 3 associated gene(s):
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*** [[Ec-23_002710]]
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*** [[Ec-15_004230]]
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*** [[Ec-18_003420]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000030]]
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*** [[Ec-02_001020]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRATE--COA-LIGASE-RXN CITRATE--COA-LIGASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R23-RXN R23-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7929 RXN-7929]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8457 RXN-8457]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-200783}}
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{{#set: left end position=4284830}}
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{{#set: common name=reductive TCA cycle II}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
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{{#set: right end position=4292393}}
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{{#set: reaction found=6}}
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{{#set: centisome position=85.90842    }}
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{{#set: total reaction=12}}
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{{#set: common name=Esi_0109_0085|Esi0109_0085}}
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{{#set: completion rate=50.0}}
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{{#set: reaction associated=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN|GPPSYN-RXN|RXN-9003|RXN-9384|RXN0-5180}}
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{{#set: pathway associated=PWY-7736|PWY-7410|PWY-6859|PWY-7709|PWY-6383|PWY-7235|PWY-7182|PWY-6708|PWY-7141|PWY-5123|PWY-5122|PWY-7102|PWY-7659|PWY-5870|PWY3O-19}}

Revision as of 13:20, 21 March 2018

Gene Ec-24_003910

  • left end position:
    • 4284830
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4292393
  • centisome position:
    • 85.90842
  • Synonym(s):
    • Esi_0109_0085
    • Esi0109_0085

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-1622&oldid=17703"