Difference between revisions of "Ec-01 012040"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-77...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthet...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-7742 TAX-7742]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ascorbate recycling (cytosolic)
+
** long chain acyl-coA synthetase
 +
** long chain acyl-CoA synthetase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
−
** vitamin C recycling (cytosolic)
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''4''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
−
* [[1.6.5.4-RXN]]
+
** 1 [[16-HYDROXYPALMITATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17621]][c] '''+''' 1 [[AMP]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[Ec-26_002470]]
+
** 1 16-hydroxypalmitate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 16-hydroxypalmitoyl-CoA[c] '''+''' 1 AMP[c]
−
*** [[Ec-22_003850]]
+
 
−
** 2 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[annotation-esiliculosus_genome]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-aragem]]
+
* Gene: [[Ec-12_008720]]
−
* [[1.8.5.1-RXN]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 associated gene(s):
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[Ec-02_003740]]
+
* Gene: [[Ec-01_001560]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[annotation-esiliculosus_genome]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[RXN-10981]]
+
* Gene: [[Ec-02_006430]]
−
** 0 associated gene:
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 reconstruction source(s) associated:
+
*** Assignment: AUTOMATED-NAME-MATCH
−
*** [[annotation-esiliculosus_genome]]
+
* Gene: [[Ec-03_003710]]
−
* [[RXN-3523]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 0 associated gene:
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** 1 reconstruction source(s) associated:
+
== Pathways  ==
−
*** [[annotation-esiliculosus_genome]]
+
* [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321]
−
== Reaction(s) not found ==
+
** '''1''' reactions found over '''16''' reactions in the full pathway
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10980 RXN-10980]
+
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-3522 RXN-3522]
+
** '''4''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''6''' reactions found over '''19''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-MAP:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
+
{{#set: common name=long chain acyl-coA synthetase}}
−
{{#set: taxonomic range=TAX-7742}}
+
{{#set: common name=long chain acyl-CoA synthetase}}
−
{{#set: common name=ascorbate recycling (cytosolic)}}
+
{{#set: ec number=EC-6.2.1.3}}
−
{{#set: common name=vitamin C recycling (cytosolic)}}
+
{{#set: gene associated=Ec-12_008720|Ec-01_001560|Ec-02_006430|Ec-03_003710}}
−
{{#set: reaction found=4}}
+
{{#set: in pathway=PWY-321|PWY-6733|PWY-1121}}
−
{{#set: total reaction=6}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: completion rate=67.0}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:20, 21 March 2018

Reaction RXN-16389

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 16-hydroxypalmitate[c] + 1 coenzyme A[c] + 1 ATP[c] => 1 diphosphate[c] + 1 16-hydroxypalmitoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-321, cutin biosynthesis: PWY-321
    • 1 reactions found over 16 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 4 reactions found over 18 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 6 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_012040&oldid=17781"