Difference between revisions of "PWY-6386"

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(Created page with "Category:Gene == Gene Ec-02_006430 == * left end position: ** 6496630 * transcription direction: ** NEGATIVE * right end position: ** 6512269 * centisome position: ** 99.5...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN3-RXN THIAZOLSYN3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methyl-5(b-hy...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-02_006430 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN3-RXN THIAZOLSYN3-RXN] ==
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* left end position:
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* direction:
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** 6496630
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative
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* right end position:
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* ec number:
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** 6512269
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** [http://enzyme.expasy.org/EC/2.7.1.50 EC-2.7.1.50]
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* centisome position:
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** 99.52264   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0355_0029
 
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** Esi0355_0029
 
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** LACS
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACYLCOASYN-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[ATP]][c] '''+''' 1 [[THZ]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[THZ-P]][c]
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***automated-name-match
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* With common name(s):
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* [[LINOLENOYL-RXN]]
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** 1 ATP[c] '''+''' 1 5-(2-hydroxyethyl)-4-methylthiazole[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 4-methyl-5-(2-phosphooxyethyl)thiazole[c]
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** esiliculosus_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[R223-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-01_008860]]
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***automated-name-match
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-12184]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** esiliculosus_genome
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== Pathways ==
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***automated-name-match
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* [[PWY-6897]], thiamine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6897 PWY-6897]
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* [[RXN-12978]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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** esiliculosus_genome
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
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***automated-name-match
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[RXN-13290]]
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* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
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** esiliculosus_genome
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** '''3''' reactions found over '''6''' reactions in the full pathway
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***automated-name-match
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== Reconstruction information  ==
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* [[RXN-13614]]
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* Category: [[annotation]]
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** esiliculosus_genome
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** Source: [[annotation-esiliculosus_genome]]
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***automated-name-match
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*** Tool: [[pathwaytools]]
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* [[RXN-16380]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16389]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16393]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16401]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16402]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16415]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16418]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-7904]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-9623]]
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** esiliculosus_genome
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***automated-name-match
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** [[pantograph]]-[[aragem]]
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* [[RXN-9644]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-9673]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN0-7238]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN0-7239]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN0-7248]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN66-469]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN66-477]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN66-480]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN66-483]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN66-484]]
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** esiliculosus_genome
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***automated-name-match
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* [[TRANS-RXN0-623]]
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** esiliculosus_genome
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***automated-name-match
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== Pathways associated ==
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* [[PWY-6920]]
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* [[P221-PWY]]
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* [[PWY-321]]
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* [[PWY-5972]]
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* [[PWY-5971]]
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* [[PWY-7033]]
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* [[PWY-5136]]
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* [[PWY66-389]]
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* [[PWY-7288]]
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* [[PWY-6733]]
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* [[PWY-7094]]
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* [[PWY66-391]]
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* [[FAO-PWY]]
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* [[PWY-1121]]
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* [[PWY-6873]]
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* [[PWY-5147]]
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* [[PWY-5143]]
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* [[PWY-5885]]
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* [[PWY-7724]]
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* [[PWY-6001]]
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* [[PWY-6000]]
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* [[PWY-7049]]
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* [[PWY66-387]]
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* [[PWY-5989]]
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* [[PWY-6803]]
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* [[PWY66-388]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=6496630}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24212 24212]
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{{#set: right end position=6512269}}
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* LIGAND-RXN:
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{{#set: centisome position=99.52264    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04448 R04448]
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{{#set: common name=Esi_0355_0029|Esi0355_0029|LACS}}
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* UNIPROT:
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{{#set: reaction associated=ACYLCOASYN-RXN|LINOLENOYL-RXN|R223-RXN|RXN-12184|RXN-12978|RXN-13290|RXN-13614|RXN-16380|RXN-16389|RXN-16393|RXN-16401|RXN-16402|RXN-16415|RXN-16418|RXN-7904|RXN-9623|RXN-9644|RXN-9673|RXN0-7238|RXN0-7239|RXN0-7248|RXN66-469|RXN66-477|RXN66-480|RXN66-483|RXN66-484|TRANS-RXN0-623}}
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** [http://www.uniprot.org/uniprot/P41835 P41835]
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{{#set: pathway associated=PWY-6920|P221-PWY|PWY-321|PWY-5972|PWY-5971|PWY-7033|PWY-5136|PWY66-389|PWY-7288|PWY-6733|PWY-7094|PWY66-391|FAO-PWY|PWY-1121|PWY-6873|PWY-5147|PWY-5143|PWY-5885|PWY-7724|PWY-6001|PWY-6000|PWY-7049|PWY66-387|PWY-5989|PWY-6803|PWY66-388}}
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** [http://www.uniprot.org/uniprot/O28204 O28204]
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** [http://www.uniprot.org/uniprot/P76423 P76423]
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** [http://www.uniprot.org/uniprot/Q57233 Q57233]
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** [http://www.uniprot.org/uniprot/Q9CG46 Q9CG46]
 +
** [http://www.uniprot.org/uniprot/P39593 P39593]
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** [http://www.uniprot.org/uniprot/P40386 P40386]
 +
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative}}
 +
{{#set: ec number=EC-2.7.1.50}}
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{{#set: gene associated=Ec-01_008860}}
 +
{{#set: in pathway=PWY-6897|PWY-7356|PWY-7357}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:21, 21 March 2018

Reaction THIAZOLSYN3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 5-(2-hydroxyethyl)-4-methylthiazole[c] => 1 H+[c] + 1 ADP[c] + 1 4-methyl-5-(2-phosphooxyethyl)thiazole[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6897, thiamine salvage II: PWY-6897
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7356, thiamine salvage IV (yeast): PWY-7356
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7357, thiamine formation from pyrithiamine and oxythiamine (yeast): PWY-7357
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6386&oldid=17855"