Difference between revisions of "CITSYN-RXN"

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(Created page with "Category:Gene == Gene Ec-07_002060 == * left end position: ** 2245459 * transcription direction: ** POSITIVE * right end position: ** 2257466 * centisome position: ** 29.0...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] == * direction: ** LEFT-TO-RIGHT * common name: ** Phospholipase/carboxylester...")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Ec-07_002060 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10711 RXN-10711] ==
* left end position:
+
* direction:
** 2245459
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** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
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** Phospholipase/carboxylesterase/thioesterase
* right end position:
+
** carboxylic ester hydrolase
** 2257466
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** Carboxylesterase, type B
* centisome position:
+
** putative serine esterase
** 29.077105   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
** Esi_0061_0051
 
** Esi0061_0051
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[1.1.1.39-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[CPD-10546]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[METOH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
***ec-number
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* With common name(s):
* [[OXALODECARB-RXN]]
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** 1 methyl (indol-3-yl)acetate[c] '''+''' 1 H2O[c] '''=>''' 1 methanol[c] '''+''' 1 H+[c] '''+''' 1 indole-3-acetate[c]
** esiliculosus_genome
+
 
***go-term
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== Genes associated with this reaction  ==
== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
* [[PWY-3641]]
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* Gene: [[Ec-16_002070]]
* [[GLUCONEO-PWY]]
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** Source: [[annotation-esiliculosus_genome]]
* [[PWY-7384]]
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*** Assignment: AUTOMATED-NAME-MATCH
* [[P184-PWY]]
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* Gene: [[Ec-12_006850]]
* [[METHYLGALLATE-DEGRADATION-PWY]]
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** Source: [[annotation-esiliculosus_genome]]
* [[PWY-7686]]
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*** Assignment: AUTOMATED-NAME-MATCH
* [[PWY-7115]]
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* Gene: [[Ec-25_000250]]
* [[PWY-7118]]
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** Source: [[annotation-esiliculosus_genome]]
* [[PWY-6339]]
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*** Assignment: GO-TERM
 +
* Gene: [[Ec-19_001900]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-27_004830]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-6303]], methyl indole-3-acetate interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6303 PWY-6303]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=2245459}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=Phospholipase/carboxylesterase/thioesterase}}
{{#set: right end position=2257466}}
+
{{#set: common name=carboxylic ester hydrolase}}
{{#set: centisome position=29.077105    }}
+
{{#set: common name=Carboxylesterase, type B}}
{{#set: common name=Esi_0061_0051|Esi0061_0051}}
+
{{#set: common name=putative serine esterase}}
{{#set: reaction associated=1.1.1.39-RXN|OXALODECARB-RXN}}
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{{#set: ec number=EC-3.1.1.1}}
{{#set: pathway associated=PWY-3641|GLUCONEO-PWY|PWY-7384|P184-PWY|METHYLGALLATE-DEGRADATION-PWY|PWY-7686|PWY-7115|PWY-7118|PWY-6339}}
+
{{#set: gene associated=Ec-16_002070|Ec-12_006850|Ec-25_000250|Ec-19_001900|Ec-27_004830}}
 +
{{#set: in pathway=PWY-6303}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:22, 21 March 2018

Reaction RXN-10711

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phospholipase/carboxylesterase/thioesterase
    • carboxylic ester hydrolase
    • Carboxylesterase, type B
    • putative serine esterase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6303, methyl indole-3-acetate interconversion: PWY-6303
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links