Difference between revisions of "PWY0-1433"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-48...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-4891]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** Cysteinyl-tRNA Synthetase
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** 3-methylbutanol biosynthesis (engineered)
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** Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
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** Cysteinyl-tRNA synthetase/mycothiol ligase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.16 EC-6.1.1.16]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''7''' reactions in the full pathway
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** 1 [[PROTON]][c] '''+''' 1 [[CYS-tRNAs]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-CYS-tRNAs]][c]
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* [[2-ISOPROPYLMALATESYN-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H+[c] '''+''' 1 a tRNAcys[c] '''+''' 1 L-cysteine[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 an L-cysteinyl-[tRNAcys][c]
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*** [[Ec-28_002630]]
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*** [[Ec-18_000460]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-12_001440]]
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*** [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* [[3-ISOPROPYLMALDEHYDROG-RXN]]
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***EC-NUMBER
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** 1 associated gene(s):
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* [[Ec-10_004180]]
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*** [[Ec-16_002120]]
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** ESILICULOSUS_GENOME
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** 2 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-02_002270]]
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*** [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* [[3-ISOPROPYLMALISOM-RXN]]
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***EC-NUMBER
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** 3 associated gene(s):
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== Pathways  ==
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*** [[Ec-sdr_f_000030]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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*** [[Ec-13_001950]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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*** [[Ec-12_000170]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Tool: [[pathwaytools]]
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* [[RXN-7800]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-8991]]
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** 3 associated gene(s):
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*** [[Ec-13_001950]]
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*** [[Ec-12_000170]]
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*** [[Ec-sdr_f_000030]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7692 RXN-7692]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7693 RXN-7693]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4891}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03650 R03650]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=3-methylbutanol biosynthesis (engineered)}}
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** [http://www.uniprot.org/uniprot/Q9PPB8 Q9PPB8]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/Q06752 Q06752]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/P43816 P43816]
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{{#set: completion rate=71.0}}
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** [http://www.uniprot.org/uniprot/O29836 O29836]
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** [http://www.uniprot.org/uniprot/Q9CEJ0 Q9CEJ0]
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** [http://www.uniprot.org/uniprot/O58370 O58370]
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** [http://www.uniprot.org/uniprot/O83129 O83129]
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** [http://www.uniprot.org/uniprot/Q9ZE62 Q9ZE62]
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** [http://www.uniprot.org/uniprot/Q9ZKW6 Q9ZKW6]
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** [http://www.uniprot.org/uniprot/Q9WZH8 Q9WZH8]
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** [http://www.uniprot.org/uniprot/P41259 P41259]
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** [http://www.uniprot.org/uniprot/O51545 O51545]
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** [http://www.uniprot.org/uniprot/Q9Z6X4 Q9Z6X4]
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** [http://www.uniprot.org/uniprot/O67163 O67163]
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** [http://www.uniprot.org/uniprot/Q9JWJ3 Q9JWJ3]
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** [http://www.uniprot.org/uniprot/P47495 P47495]
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** [http://www.uniprot.org/uniprot/P75423 P75423]
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** [http://www.uniprot.org/uniprot/P74330 P74330]
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** [http://www.uniprot.org/uniprot/Q9UWP2 Q9UWP2]
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** [http://www.uniprot.org/uniprot/P21888 P21888]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Cysteinyl-tRNA Synthetase}}
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{{#set: common name=Aminoacyl-tRNA synthetase, class 1a, anticodon-binding}}
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{{#set: common name=Cysteinyl-tRNA synthetase/mycothiol ligase}}
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{{#set: ec number=EC-6.1.1.16}}
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{{#set: gene associated=Ec-12_001440|Ec-10_004180|Ec-02_002270}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:23, 21 March 2018

Pathway PWY-6871

  • taxonomic range:
  • common name:
    • 3-methylbutanol biosynthesis (engineered)
  • Synonym(s):

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY0-1433&oldid=18087"