Difference between revisions of "TransportSeed CU+2"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] == * direction: ** REVERSIBLE * common name: **...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTOHEMEFERROCHELAT-RXN PROTOHEMEFERROCHELAT-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* common name:
 
* common name:
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** sulfate reduction II (assimilatory)
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** Ferrochelatase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.99.1.1 EC-4.99.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** sulfur metabolism
 
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** sulfur assimilation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[SULFATE-ADENYLYLTRANS-RXN]]
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** 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[FE+2]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-12_000240]]
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** 1 ferroheme b[c] '''+''' 2 H+[c] '''<=>''' 1 Fe2+[c] '''+''' 1 protoporphyrin IX[c]
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*** [[Ec-02_000870]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* Gene: [[Ec-01_005360]]
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* [[SULFITE-REDUCTASE-FERREDOXIN-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Ec-02_004340]]
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** Source: [[orthology-aragem]]
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*** [[Ec-02_004330]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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* [[PWY0-1415]], superpathway of heme biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415]
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*** [[annotation-esiliculosus_genome]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-aragem]]
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* [[HEMESYN2-PWY]], heme biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEMESYN2-PWY HEMESYN2-PWY]
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== Reaction(s) not found ==
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=1.8.4.9-RXN 1.8.4.9-RXN]
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* [[HEME-BIOSYNTHESIS-II]], heme biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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* RHEA:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00310 R00310]
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{{#set: common name=sulfate reduction II (assimilatory)}}
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* UNIPROT:
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{{#set: common name=sulfur metabolism|sulfur assimilation}}
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** [http://www.uniprot.org/uniprot/P22830 P22830]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P22315 P22315]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P28602 P28602]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/Q05338 Q05338]
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** [http://www.uniprot.org/uniprot/P42043 P42043]
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** [http://www.uniprot.org/uniprot/P23871 P23871]
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** [http://www.uniprot.org/uniprot/P32396 P32396]
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** [http://www.uniprot.org/uniprot/Q9CFB4 Q9CFB4]
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** [http://www.uniprot.org/uniprot/P56107 P56107]
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** [http://www.uniprot.org/uniprot/O67083 O67083]
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** [http://www.uniprot.org/uniprot/Q9PI08 Q9PI08]
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** [http://www.uniprot.org/uniprot/Q9JVA5 Q9JVA5]
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** [http://www.uniprot.org/uniprot/P22600 P22600]
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** [http://www.uniprot.org/uniprot/P43868 P43868]
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** [http://www.uniprot.org/uniprot/P16622 P16622]
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** [http://www.uniprot.org/uniprot/Q59735 Q59735]
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** [http://www.uniprot.org/uniprot/P43413 P43413]
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** [http://www.uniprot.org/uniprot/P54225 P54225]
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** [http://www.uniprot.org/uniprot/P42045 P42045]
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** [http://www.uniprot.org/uniprot/O64391 O64391]
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** [http://www.uniprot.org/uniprot/P42044 P42044]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Ferrochelatase}}
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{{#set: ec number=EC-4.99.1.1}}
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{{#set: gene associated=Ec-01_005360}}
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{{#set: in pathway=PWY0-1415|HEMESYN2-PWY|HEME-BIOSYNTHESIS-II}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:23, 21 March 2018

Reaction PROTOHEMEFERROCHELAT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Ferrochelatase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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