Difference between revisions of "RXN0-7080"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Gene == Gene Ec-07_004830 == * left end position: ** 4704199 * transcription direction: ** POSITIVE * right end position: ** 4708557 * centisome position: ** 60.9...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-DECARBOXYLASE-RXN TYROSINE-DECARBOXYLASE-RXN] ==
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== Gene Ec-07_004830 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4704199
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* common name:
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* transcription direction:
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** Tyrosine Decarboxylase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.1.25 EC-4.1.1.25]
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** 4708557
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* centisome position:
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** 60.91605   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0125_0050
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** Esi0125_0050
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.7.7.14-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[TYRAMINE]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 L-tyrosine[c] '''=>''' 1 CO2[c] '''+''' 1 tyramine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-14_004250]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6133]], (S)-reticuline biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6133 PWY-6133]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5254]], methanofuran biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5254 PWY-5254]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7297]], octopamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7297 PWY-7297]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5474]], hydroxycinnamic acid tyramine amides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5474 PWY-5474]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6802]], salidroside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6802 PWY-6802]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7782]]
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* [[PWY4FS-6]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4704199}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14345 14345]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4708557}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00736 R00736]
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{{#set: centisome position=60.91605    }}
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* UNIPROT:
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{{#set: common name=Esi_0125_0050|Esi0125_0050}}
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** [http://www.uniprot.org/uniprot/Q06086 Q06086]
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{{#set: reaction associated=2.7.7.14-RXN}}
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** [http://www.uniprot.org/uniprot/P54768 P54768]
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{{#set: pathway associated=PWY-7782|PWY4FS-6}}
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** [http://www.uniprot.org/uniprot/P54769 P54769]
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** [http://www.uniprot.org/uniprot/P54770 P54770]
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** [http://www.uniprot.org/uniprot/O82417 O82417]
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** [http://www.uniprot.org/uniprot/P54771 P54771]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Tyrosine Decarboxylase}}
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{{#set: ec number=EC-4.1.1.25}}
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{{#set: gene associated=Ec-14_004250}}
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{{#set: in pathway=PWY-3581|PWY-6133|PWY-5254|PWY-7297|PWY-5474|PWY-6802}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:23, 21 March 2018

Gene Ec-07_004830

  • left end position:
    • 4704199
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4708557
  • centisome position:
    • 60.91605
  • Synonym(s):
    • Esi_0125_0050
    • Esi0125_0050

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-7080&oldid=18114"