Difference between revisions of "TRP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13162 RXN-13162] == * direction: ** LEFT-TO-RIGHT * common name: ** Isopentenyl-diphosphate del...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Cytochromes-C-Oxidized Cytochromes-C-Oxidized] == * common name: ** an oxidized c-type cytochro...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13162 RXN-13162] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Cytochromes-C-Oxidized Cytochromes-C-Oxidized] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs
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** an oxidized c-type cytochrome
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.21 EC-2.5.1.21]
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* Synonym(s):
 
* Synonym(s):
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** a ferri c-type cytochrome
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-14107]]
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** 2 [[FARNESYL-PP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 2 [[PPI]][c] '''+''' 1 [[SQUALENE]][c]
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* [[RXN-15815]]
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* With common name(s):
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* [[RXN-12876]]
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** 2 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 NAD(P)+[c] '''+''' 2 diphosphate[c] '''+''' 1 squalene[c]
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* [[RXN-15816]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
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* [[RXN-15830]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CYTOCHROME-C-OXIDASE-RXN]]
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* [[Ec-11_001030]]
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== Reaction(s) of unknown directionality ==
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** ESILICULOSUS_GENOME
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* [[1.10.2.2-RXN]]
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5670]], epoxysqualene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=an oxidized c-type cytochrome}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32302 32302]
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{{#set: common name=a ferri c-type cytochrome}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32296 32296]
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{{#set: consumed by=RXN-14107|RXN-15815|RXN-12876|RXN-15816}}
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* LIGAND-RXN:
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{{#set: produced by=RXN-15830|CYTOCHROME-C-OXIDASE-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06223 R06223]
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{{#set: reversible reaction associated=1.10.2.2-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs}}
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{{#set: ec number=EC-2.5.1.21}}
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{{#set: gene associated=Ec-11_001030}}
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{{#set: in pathway=PWY-5670}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:23, 21 March 2018

Metabolite Cytochromes-C-Oxidized

  • common name:
    • an oxidized c-type cytochrome
  • Synonym(s):
    • a ferri c-type cytochrome

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=TRP&oldid=18121"