Difference between revisions of "Ec-11 005000"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADPH-RXN NITRATE-REDUCTASE-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NITRATE-REDUCTASE-NADPH-RXN NITRATE-REDUCTASE-NADPH-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-186801 TAX-186801]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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* common name:
 
* common name:
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** 1-butanol autotrophic biosynthesis (engineered)
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** NAD(P)H-Nitrate reductase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.7.1.3 EC-1.7.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''8''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
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* [[2PGADEHYDRAT-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[NITRATE]][c] '''=>''' 1 [[NITRITE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-27_004000]]
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 nitrate[c] '''=>''' 1 nitrite[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
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*** [[Ec-26_004120]]
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*** [[Ec-14_005400]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-10_005740]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[3PGAREARR-RXN]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** 7 associated gene(s):
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== Pathways  ==
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*** [[Ec-24_002670]]
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* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
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*** [[Ec-03_002170]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[Ec-27_000330]]
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== Reconstruction information  ==
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*** [[Ec-03_002160]]
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* Category: [[annotation]]
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*** [[Ec-01_000980]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-06_009930]]
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*** Tool: [[pathwaytools]]
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*** [[Ec-10_005410]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[CALVIN-PWY]]
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** 0 associated gene:
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
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*** [[Ec-26_004170]]
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*** [[Ec-12_000950]]
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*** [[Ec-06_006860]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
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*** [[Ec-12_004530]]
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*** [[Ec-01_001350]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PWY-101]]
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** 0 associated gene:
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* [[PWY-6883]]
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** 0 associated gene:
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* [[PYRUVDEH-RXN]]
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** 8 associated gene(s):
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*** [[Ec-01_010530]]
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*** [[Ec-25_000020]]
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*** [[Ec-27_000530]]
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*** [[Ec-18_000080]]
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*** [[Ec-27_004160]]
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*** [[Ec-23_002710]]
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*** [[Ec-25_000140]]
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*** [[Ec-18_003420]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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−
== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-186801}}
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* RHEA:
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{{#set: taxonomic range=TAX-33682}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19061 19061]
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{{#set: taxonomic range=TAX-1117}}
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* LIGAND-RXN:
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{{#set: common name=1-butanol autotrophic biosynthesis (engineered)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00796 R00796]
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{{#set: reaction found=8}}
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* UNIPROT:
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{{#set: total reaction=11}}
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** [http://www.uniprot.org/uniprot/Q12561 Q12561]
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{{#set: completion rate=73.0}}
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** [http://www.uniprot.org/uniprot/P22945 P22945]
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** [http://www.uniprot.org/uniprot/P39863 P39863]
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** [http://www.uniprot.org/uniprot/Q05531 Q05531]
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** [http://www.uniprot.org/uniprot/P36858 P36858]
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** [http://www.uniprot.org/uniprot/P36842 P36842]
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** [http://www.uniprot.org/uniprot/P39864 P39864]
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** [http://www.uniprot.org/uniprot/Q01696 Q01696]
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** [http://www.uniprot.org/uniprot/Q00284 Q00284]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=NAD(P)H-Nitrate reductase}}
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{{#set: ec number=EC-1.7.1.3}}
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{{#set: gene associated=Ec-10_005740}}
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{{#set: in pathway=PWY-5675}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:23, 21 March 2018

Reaction NITRATE-REDUCTASE-NADPH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)H-Nitrate reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADPH[c] + 1 nitrate[c] => 1 nitrite[c] + 1 NADP+[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5675, nitrate reduction V (assimilatory): PWY-5675
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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