Difference between revisions of "RXN-11059"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14073 RXN-14073] == * direction: ** LEFT-TO-RIGHT * common name: ** glycerophosphodiester phosp...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14073 RXN-14073] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5061 RXN-5061] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** glycerophosphodiester phosphodiesterase
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
+
** [http://enzyme.expasy.org/EC/1.5.7.1 EC-1.5.7.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[GLYCEROPHOSPHOGLYCEROL]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLYCEROL-3P]][c]
+
** 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
 
* With common name(s):
 
* With common name(s):
** 1 glycerophosphoglycerol[c] '''+''' 1 H2O[c] '''=>''' 1 glycerol[c] '''+''' 1 H+[c] '''+''' 1 sn-glycerol 3-phosphate[c]
+
** 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 1 an N5-methyl-tetrahydrofolate[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Ec-23_002410]]
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
* [[Ec-23_002720]]
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* LIGAND-RXN:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29910 29910]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01217 R01217]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=glycerophosphodiester phosphodiesterase}}
+
{{#set: ec number=EC-1.5.7.1}}
{{#set: ec number=EC-3.1.4.46}}
+
{{#set: in pathway=PWY-2201|CODH-PWY}}
{{#set: gene associated=Ec-23_002410|Ec-23_002720}}
+
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:23, 21 March 2018

Reaction RXN-5061

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-2201, folate transformations I: PWY-2201
    • 12 reactions found over 12 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links