Difference between revisions of "2-Me-Branched-234-Sat-FALD"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11057 RXN-11057] == * direction: ** LEFT-TO-RIGHT * common name: ** Aromatic-ring hydroxylase-l...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11057 RXN-11057] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)
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** Aromatic-ring hydroxylase-like
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** Monooxygenase, FAD-binding
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* ec number:
 +
** [http://enzyme.expasy.org/EC/1.14.14.1 EC-1.14.14.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''14''' reactions found over '''17''' reactions in the full pathway
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* With identifiers:
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* [[CDPREDUCT-RXN]]
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** 1 [[N-ACETYL-5-METHOXY-TRYPTAMINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[N-ACETYL-SEROTONIN]][c] '''+''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c]
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** 7 associated gene(s):
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* With common name(s):
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*** [[Ec-06_005120]]
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** 1 melatonin[c] '''+''' 1 oxygen[c] '''+''' 1 a reduced [NADPH-hemoprotein reductase][c] '''=>''' 1 H2O[c] '''+''' 1 N-acetyl-serotonin[c] '''+''' 1 formaldehyde[c] '''+''' 1 an oxidized [NADPH-hemoprotein reductase][c]
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*** [[Ec-11_002170]]
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*** [[Ec-19_000440]]
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== Genes associated with this reaction  ==
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*** [[Ec-11_002180]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-21_002920]]
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* Gene: [[Ec-01_010880]]
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*** [[Ec-17_003700]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-06_005570]]
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*** Assignment: EC-NUMBER
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-00_001320]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: EC-NUMBER
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* [[DCDPKIN-RXN]]
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* Gene: [[Ec-26_003280]]
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** 7 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-04_001140]]
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*** Assignment: EC-NUMBER
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*** [[Ec-11_005170]]
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== Pathways  ==
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*** [[Ec-03_001380]]
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* [[PWY-6398]], melatonin degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6398 PWY-6398]
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*** [[Ec-26_003930]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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*** [[Ec-07_000140]]
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== Reconstruction information  ==
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*** [[Ec-22_003280]]
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* Category: [[annotation]]
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*** [[Ec-11_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTDPKIN-RXN]]
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** 7 associated gene(s):
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*** [[Ec-26_003930]]
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*** [[Ec-04_001140]]
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*** [[Ec-11_004330]]
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*** [[Ec-22_003280]]
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*** [[Ec-11_005170]]
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*** [[Ec-03_001380]]
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*** [[Ec-07_000140]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[DTMPKI-RXN]]
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** 1 associated gene(s):
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*** [[Ec-20_004950]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[DUDPKIN-RXN]]
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** 7 associated gene(s):
+
−
*** [[Ec-11_005170]]
+
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*** [[Ec-11_004330]]
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*** [[Ec-03_001380]]
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*** [[Ec-04_001140]]
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*** [[Ec-07_000140]]
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*** [[Ec-22_003280]]
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*** [[Ec-26_003930]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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−
* [[DUTP-PYROP-RXN]]
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** 1 associated gene(s):
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*** [[Ec-13_002810]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PWY-7184]]
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** 0 associated gene:
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* [[PWY-7187]]
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** 0 associated gene:
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* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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** 5 associated gene(s):
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*** [[Ec-19_000440]]
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*** [[Ec-11_002170]]
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*** [[Ec-21_002920]]
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*** [[Ec-06_005120]]
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*** [[Ec-06_005570]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN0-722]]
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** 5 associated gene(s):
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*** [[Ec-06_005120]]
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*** [[Ec-11_002170]]
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*** [[Ec-21_002920]]
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*** [[Ec-06_005570]]
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*** [[Ec-19_000440]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN0-723]]
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** 1 associated gene(s):
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*** [[Ec-04_006460]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN0-724]]
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** 1 associated gene(s):
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*** [[Ec-04_006460]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[THYMIDYLATESYN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-27_004630]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[UDPREDUCT-RXN]]
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** 7 associated gene(s):
+
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*** [[Ec-19_000440]]
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*** [[Ec-21_002920]]
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*** [[Ec-17_003700]]
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*** [[Ec-11_002180]]
+
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*** [[Ec-06_005120]]
+
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*** [[Ec-06_005570]]
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*** [[Ec-11_002170]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
+
−
*** [[orthology-aragem]]
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−
== Reaction(s) not found ==
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−
* [http://metacyc.org/META/NEW-IMAGE?object=DCTP-DEAM-RXN DCTP-DEAM-RXN]
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== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-166 PWY0-166]
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{{#set: common name=Aromatic-ring hydroxylase-like}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=Monooxygenase, FAD-binding}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-1.14.14.1}}
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{{#set: common name=superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)}}
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{{#set: gene associated=Ec-01_010880|Ec-00_001320|Ec-26_003280}}
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{{#set: reaction found=14}}
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{{#set: in pathway=PWY-6398}}
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{{#set: total reaction=17}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=82.0}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:24, 21 March 2018

Reaction RXN-11057

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aromatic-ring hydroxylase-like
    • Monooxygenase, FAD-binding
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6398, melatonin degradation I: PWY-6398
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=2-Me-Branched-234-Sat-FALD&oldid=18237"