Difference between revisions of "PWY-5537"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14775 RXN-14775] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** choline dehydrogenase * ec number:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14775 RXN-14775] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** acyl-CoA oxidase, partial
+
** choline dehydrogenase
−
** acyl-CoA oxidase
+
−
** Acyl-CoA oxidase/dehydrogenase, central domain
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15668]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-15654]][c]
+
** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[Donor-H2]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 4-cis-undecenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 2-trans, 4-cis-undecadienoyl-CoA[c]
+
** 1 an oxidized unknown electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 an reduced unknown electron acceptor[c] '''+''' 1 betaine aldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-26_004320]]
+
* Gene: [[Ec-00_005920]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: GO-TERM
−
* [[Ec-22_002920]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-08_006390]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7337]], 10-cis-heptadecenoyl-CoA degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7337 PWY-7337]
+
* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
−
** '''3''' reactions found over '''12''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 36: Line 30:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=acyl-CoA oxidase, partial}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
−
{{#set: common name=acyl-CoA oxidase}}
+
* LIGAND-RXN:
−
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
−
{{#set: ec number=EC-1.3.3.6}}
+
* UNIPROT:
−
{{#set: gene associated=Ec-26_004320|Ec-22_002920|Ec-08_006390}}
+
** [http://www.uniprot.org/uniprot/P17444 P17444]
−
{{#set: in pathway=PWY-7337}}
+
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=choline dehydrogenase}}
 +
{{#set: ec number=EC-1.1.99.1}}
 +
{{#set: gene associated=Ec-00_005920}}
 +
{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:24, 21 March 2018

Reaction CHD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • choline dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized unknown electron acceptor[c] + 1 choline[c] <=> 1 an reduced unknown electron acceptor[c] + 1 betaine aldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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