Difference between revisions of "Ec-09 004680"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-130 RXN3O-130] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytochrome P450 * ec number...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-3-DIOXYGENASE-RXN NARINGENIN-3-DIOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec nu...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-130 RXN3O-130] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-3-DIOXYGENASE-RXN NARINGENIN-3-DIOXYGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Cytochrome P450
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.13.70 EC-1.14.13.70]
+
** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
 
* Synonym(s):
 
* Synonym(s):
 +
** Flavonone 3-hydroxylase
 +
** Naringenin,2-oxoglutarate 3-dioxygenase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[LANOSTEROL]][c] '''+''' 2 [[PROTON]][c] '''+''' 3 [[NADPH]][c] '''=>''' 3 [[NADP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 4 [[WATER]][c] '''+''' 1 [[44-DIMETHYL-CHOLESTA-812-24-TRIENOL]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NARINGENIN-CMPD]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 3 oxygen[c] '''+''' 1 lanosterol[c] '''+''' 2 H+[c] '''+''' 3 NADPH[c] '''=>''' 3 NADP+[c] '''+''' 1 formate[c] '''+''' 4 H2O[c] '''+''' 1 4,4-dimethyl-cholesta-8,12,24-trienol[c]
+
** 1 oxygen[c] '''+''' 1 (2S)-naringenin[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 (+)-dihydrokaempferol[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-10_006240]]
+
* Gene: [[Ec-08_003510]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***EC-NUMBER
+
* Gene: [[Ec-19_002760]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-19_002750]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6074]], zymosterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6074 PWY-6074]
+
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
−
** '''4''' reactions found over '''12''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[orthology]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[orthology-aragem]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25287 25287]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05640 R05640]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02444 R02444]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P28038 P28038]
 +
** [http://www.uniprot.org/uniprot/Q07353 Q07353]
 +
** [http://www.uniprot.org/uniprot/Q06942 Q06942]
 +
** [http://www.uniprot.org/uniprot/Q05964 Q05964]
 +
** [http://www.uniprot.org/uniprot/Q05963 Q05963]
 +
** [http://www.uniprot.org/uniprot/Q05965 Q05965]
 +
** [http://www.uniprot.org/uniprot/Q43741 Q43741]
 +
** [http://www.uniprot.org/uniprot/Q42927 Q42927]
 +
** [http://www.uniprot.org/uniprot/Q40344 Q40344]
 +
** [http://www.uniprot.org/uniprot/O49047 O49047]
 +
** [http://www.uniprot.org/uniprot/Q43262 Q43262]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Cytochrome P450}}
+
{{#set: ec number=EC-1.14.11.9}}
−
{{#set: ec number=EC-1.14.13.70}}
+
{{#set: common name=Flavonone 3-hydroxylase|Naringenin,2-oxoglutarate 3-dioxygenase}}
−
{{#set: gene associated=Ec-10_006240}}
+
{{#set: gene associated=Ec-08_003510|Ec-19_002760|Ec-19_002750}}
−
{{#set: in pathway=PWY-6074}}
+
{{#set: in pathway=PWY1F-FLAVSYN|PWY-6787}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Revision as of 13:25, 21 March 2018

Reaction NARINGENIN-3-DIOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):
    • Flavonone 3-hydroxylase
    • Naringenin,2-oxoglutarate 3-dioxygenase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-FLAVSYN, flavonoid biosynthesis: PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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