Difference between revisions of "MALONYL-COA-DECARBOXYLASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=THF THF] == * smiles: ** C(NC1(C=CC(C(=O)NC(C(=O)[O-])CCC([O-])=O)=CC=1))[CH]3(CNC2(=C(C(=O)NC(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** peptide deformylase *...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=THF THF] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.88-RXN 3.5.1.88-RXN] ==
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* smiles:
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* direction:
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** C(NC1(C=CC(C(=O)NC(C(=O)[O-])CCC([O-])=O)=CC=1))[CH]3(CNC2(=C(C(=O)NC(N)=N2)N3))
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** tetrahydropteroyl mono-L-glutamate
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** peptide deformylase
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* inchi key:
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* ec number:
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** InChIKey=MSTNYGQPCMXVAQ-RYUDHWBXSA-L
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** [http://enzyme.expasy.org/EC/3.5.1.88 EC-3.5.1.88]
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* molecular weight:
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** 443.418   
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* Synonym(s):
 
* Synonym(s):
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** H4PteGlu
 
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** 5,6,7,8-tetrahydrofolic acid
 
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** tetrahydrofolic acid
 
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** (6S)-tetrahydrofolate
 
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** H4PteGlu1
 
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** tetrahydrofolate
 
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** tetrahydrafolate
 
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** 5,6,7,8-tetrahydrofolate
 
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** THF
 
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** tetra-H-folate
 
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** th-folate
 
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** FH4
 
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** folate-H4
 
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** tetrahydropteroylglutamate
 
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** H4F
 
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** vitamin B9
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[DIHYDROFOLATEREDUCT-RXN-THF/NADP//DIHYDROFOLATE/NADPH/PROTON.37.]]
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** 1 [[FORMYL-L-METHIONYL-PEPTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[METHIONYL-PEPTIDE]][c] '''+''' 1 [[FORMATE]][c]
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* [[HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31.]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a [protein] N-terminal-formyl-L-methionine[c] '''+''' 1 H2O[c] '''=>''' 1 a [protein] N-terminal L-methionine[c] '''+''' 1 formate[c]
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* [[GLYOHMETRANS-RXN-SER/THF//GLY/METHYLENE-THF/WATER.33.]]
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* [[GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-24_001990]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-24_001980]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 135-16-0
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* LIGAND-RXN:
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* CAS : 29347-89-5
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** [http://www.genome.jp/dbget-bin/www_bget?R05635 R05635]
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* METABOLIGHTS : MTBLC57453
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=peptide deformylase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25790919 25790919]
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{{#set: ec number=EC-3.5.1.88}}
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* HMDB : HMDB01846
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{{#set: gene associated=Ec-24_001990|Ec-24_001980}}
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* LIGAND-CPD:
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{{#set: in pathway=}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00101 C00101]
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{{#set: reconstruction category=annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57453 57453]
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{{#set: reconstruction tool=pathwaytools}}
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* BIGG : 33856
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{{#set: smiles=C(NC1(C=CC(C(=O)NC(C(=O)[O-])CCC([O-])=O)=CC=1))[CH]3(CNC2(=C(C(=O)NC(N)=N2)N3))}}
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{{#set: common name=tetrahydropteroyl mono-L-glutamate}}
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{{#set: inchi key=InChIKey=MSTNYGQPCMXVAQ-RYUDHWBXSA-L}}
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{{#set: molecular weight=443.418    }}
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{{#set: common name=H4PteGlu|5,6,7,8-tetrahydrofolic acid|tetrahydrofolic acid|(6S)-tetrahydrofolate|H4PteGlu1|tetrahydrofolate|tetrahydrafolate|5,6,7,8-tetrahydrofolate|THF|tetra-H-folate|th-folate|FH4|folate-H4|tetrahydropteroylglutamate|H4F|vitamin B9}}
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{{#set: produced by=DIHYDROFOLATEREDUCT-RXN-THF/NADP//DIHYDROFOLATE/NADPH/PROTON.37.|HOMOCYSMETB12-RXN-HOMO-CYS/5-METHYL-THF//MET/THF.31.}}
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{{#set: reversible reaction associated=GLYOHMETRANS-RXN-SER/THF//GLY/METHYLENE-THF/WATER.33.|GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.}}
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Revision as of 13:25, 21 March 2018

Reaction 3.5.1.88-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • peptide deformylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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