Difference between revisions of "QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-462 RXN1F-462] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-462 RXN1F-462] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.4.1.91 EC-2.4.1.91]
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** methylerythritol phosphate pathway I
 
* Synonym(s):
 
* Synonym(s):
 +
** nonmevalonate isopentenyl diphosphate biosynthesis
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** methylerythritol phosphate degradation
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** MEP degradation
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** deoxyxylulose phosphate pathway
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** DOXP pathway
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** Rohmer pathway
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** isopentenyl diphosphate biosynthesis -- mevalonate-independent
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** nonmevalonate isoprenoid pathway
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** MEP pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''9''' reactions in the full pathway
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** 1 [[CPD-520]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD1F-437]][c]
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* [[2.7.1.148-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 quercetin[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 quercetin-3-glucoside[c]
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*** [[Ec-10_001370]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-14_000870]]
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* [[2.7.7.60-RXN]]
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** [[pantograph]]-[[aragem]]
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** 1 associated gene(s):
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* [[Ec-04_004610]]
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*** [[Ec-12_008050]]
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** [[pantograph]]-[[aragem]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-7172]]: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7172 PWY-7172]
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* [[DXPREDISOM-RXN]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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** 1 associated gene(s):
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* [[PWY-7173]], quercetin triglucoside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7173 PWY-7173]
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*** [[Ec-12_007940]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[PWY-5390]], rutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390]
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*** [[annotation-esiliculosus_genome]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** [[orthology-aragem]]
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* [[PWY-5321]], quercetin glycoside biosynthesis (Arabidopsis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5321 PWY-5321]
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* [[DXS-RXN]]
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** '''1''' reactions found over '''12''' reactions in the full pathway
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** 1 associated gene(s):
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* [[PWY-7129]], quercetin glucoside biosynthesis (Allium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7129 PWY-7129]
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*** [[Ec-15_004230]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[PWY-7137]], quercetin gentiotetraside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7137 PWY-7137]
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*** [[annotation-esiliculosus_genome]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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* [[IPPISOM-RXN]]
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* Category: [[orthology]]
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** 2 associated gene(s):
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** Source: [[orthology-aragem]]
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*** [[Ec-11_001030]]
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*** Tool: [[pantograph]]
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*** [[Ec-18_002690]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ISPH2-RXN]]
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** 1 associated gene(s):
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*** [[Ec-06_002680]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN0-302]]
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** 1 associated gene(s):
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*** [[Ec-25_000990]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN0-884]]
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** 1 associated gene(s):
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*** [[Ec-06_002680]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15878 RXN-15878]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R02158 R02158]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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{{#set: direction=LEFT-TO-RIGHT}}
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* ARACYC:
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{{#set: ec number=EC-2.4.1.91}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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{{#set: gene associated=Ec-14_000870|Ec-04_004610}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=PWY-7172|PWY-7173|PWY-5390|PWY-5321|PWY-7129|PWY-7137}}
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{{#set: common name=methylerythritol phosphate pathway I}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=nonmevalonate isopentenyl diphosphate biosynthesis|methylerythritol phosphate degradation|MEP degradation|deoxyxylulose phosphate pathway|DOXP pathway|Rohmer pathway|isopentenyl diphosphate biosynthesis -- mevalonate-independent|nonmevalonate isoprenoid pathway|MEP pathway}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reaction found=8}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=9}}
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{{#set: completion rate=89.0}}

Revision as of 13:27, 21 March 2018

Pathway NONMEVIPP-PWY

  • taxonomic range:
  • common name:
    • methylerythritol phosphate pathway I
  • Synonym(s):
    • nonmevalonate isopentenyl diphosphate biosynthesis
    • methylerythritol phosphate degradation
    • MEP degradation
    • deoxyxylulose phosphate pathway
    • DOXP pathway
    • Rohmer pathway
    • isopentenyl diphosphate biosynthesis -- mevalonate-independent
    • nonmevalonate isoprenoid pathway
    • MEP pathway

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




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