Difference between revisions of "LCYSDESULF-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACONITATEHYDR-RXN ACONITATEHYDR-RXN] == * direction: ** REVERSIBLE * common name: ** cis-aconitate...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-GLN-FRUCT-6-P-AMINOTRANS-RXN L-GLN-FRUCT-6-P-AMINOTRANS-RXN] == * direction: ** REVERSIBLE * comm...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACONITATEHYDR-RXN ACONITATEHYDR-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=L-GLN-FRUCT-6-P-AMINOTRANS-RXN L-GLN-FRUCT-6-P-AMINOTRANS-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** cis-aconitate hydratase
+
** glutamine-fructose-6-phosphate transaminase (isomerizing)
−
** Aconitate hydratase,
+
* ec number:
−
** Aconitase/3-isopropylmalate dehydratase, swivel
+
** [http://enzyme.expasy.org/EC/2.6.1.16 EC-2.6.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CIS-ACONITATE]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
+
** 1 [[GLN]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[D-GLUCOSAMINE-6-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 cis-aconitate[c] '''<=>''' 1 D-threo-isocitrate[c]
+
** 1 L-glutamine[c] '''+''' 1 &beta;-D-fructofuranose 6-phosphate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 D-glucosamine 6-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-12_000170]]
+
* Gene: [[Ec-22_000810]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-16_001000]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
+
* [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGALSYN-PWY UDPNACETYLGALSYN-PWY]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
+
* [[PWY-6749]], CMP-legionaminate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6749 PWY-6749]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
+
* [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=UDPNAGSYN-PWY UDPNAGSYN-PWY]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5392]], reductive TCA cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392]
+
−
** '''6''' reactions found over '''12''' reactions in the full pathway
+
−
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
+
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
−
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
+
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
+
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
−
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
+
−
** '''8''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
+
−
** '''11''' reactions found over '''18''' reactions in the full pathway
+
−
* [[REDCITCYC]], TCA cycle VIII (helicobacter): [http://metacyc.org/META/NEW-IMAGE?object=REDCITCYC REDCITCYC]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124]
+
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 60: Line 33:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22144 22144]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13237 13237]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00768 R00768]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q06210 Q06210]
 +
** [http://www.uniprot.org/uniprot/Q9RXK9 Q9RXK9]
 +
** [http://www.uniprot.org/uniprot/P39754 P39754]
 +
** [http://www.uniprot.org/uniprot/P0A588 P0A588]
 +
** [http://www.uniprot.org/uniprot/O84823 O84823]
 +
** [http://www.uniprot.org/uniprot/Q9WXZ5 Q9WXZ5]
 +
** [http://www.uniprot.org/uniprot/Q9K1P9 Q9K1P9]
 +
** [http://www.uniprot.org/uniprot/Q9Z6U0 Q9Z6U0]
 +
** [http://www.uniprot.org/uniprot/Q9PLA4 Q9PLA4]
 +
** [http://www.uniprot.org/uniprot/Q58815 Q58815]
 +
** [http://www.uniprot.org/uniprot/Q9PMT4 Q9PMT4]
 +
** [http://www.uniprot.org/uniprot/P44708 P44708]
 +
** [http://www.uniprot.org/uniprot/O26060 O26060]
 +
** [http://www.uniprot.org/uniprot/O66648 O66648]
 +
** [http://www.uniprot.org/uniprot/O83833 O83833]
 +
** [http://www.uniprot.org/uniprot/Q9V249 Q9V249]
 +
** [http://www.uniprot.org/uniprot/O26273 O26273]
 +
** [http://www.uniprot.org/uniprot/Q9ZJ94 Q9ZJ94]
 +
** [http://www.uniprot.org/uniprot/Q9JWN9 Q9JWN9]
 +
** [http://www.uniprot.org/uniprot/P47856 P47856]
 +
** [http://www.uniprot.org/uniprot/P53704 P53704]
 +
** [http://www.uniprot.org/uniprot/Q56206 Q56206]
 +
** [http://www.uniprot.org/uniprot/P08633 P08633]
 +
** [http://www.uniprot.org/uniprot/P25195 P25195]
 +
** [http://www.uniprot.org/uniprot/P40831 P40831]
 +
** [http://www.uniprot.org/uniprot/P72720 P72720]
 +
** [http://www.uniprot.org/uniprot/Q09740 Q09740]
 +
** [http://www.uniprot.org/uniprot/O19908 O19908]
 +
** [http://www.uniprot.org/uniprot/Q84421 Q84421]
 +
** [http://www.uniprot.org/uniprot/Q19130 Q19130]
 +
** [http://www.uniprot.org/uniprot/Q19699 Q19699]
 +
** [http://www.uniprot.org/uniprot/O86781 O86781]
 +
** [http://www.uniprot.org/uniprot/Q9S168 Q9S168]
 +
** [http://www.uniprot.org/uniprot/Q56275 Q56275]
 +
** [http://www.uniprot.org/uniprot/P14742 P14742]
 +
** [http://www.uniprot.org/uniprot/P17169 P17169]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=cis-aconitate hydratase}}
+
{{#set: common name=glutamine-fructose-6-phosphate transaminase (isomerizing)}}
−
{{#set: common name=Aconitate hydratase,}}
+
{{#set: ec number=EC-2.6.1.16}}
−
{{#set: common name=Aconitase/3-isopropylmalate dehydratase, swivel}}
+
{{#set: gene associated=Ec-22_000810}}
−
{{#set: gene associated=Ec-12_000170|Ec-16_001000}}
+
{{#set: in pathway=UDPNACETYLGALSYN-PWY|PWY-6749|UDPNAGSYN-PWY}}
−
{{#set: in pathway=PWY-5913|PWY-6969|PWY-6549|PWY-5392|TCA|P23-PWY|P105-PWY|GLYOXYLATE-BYPASS|FERMENTATION-PWY|PWY-6728|REDCITCYC|PWY-7254|PWY-7124|PWY66-398|PWY-5690}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:28, 21 March 2018

Reaction L-GLN-FRUCT-6-P-AMINOTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • glutamine-fructose-6-phosphate transaminase (isomerizing)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 β-D-fructofuranose 6-phosphate[c] <=> 1 L-glutamate[c] + 1 D-glucosamine 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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