Difference between revisions of "PWY-6731"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Gene == Gene Ec-07_007020 == * left end position: ** 6721223 * transcription direction: ** NEGATIVE * right end position: ** 6728877 * centisome position: ** 87.0...")
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109] ==
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== Gene Ec-07_007020 ==
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* taxonomic range:
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* left end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** 6721223
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* common name:
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* transcription direction:
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** 2-methylbutanoate biosynthesis
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** NEGATIVE
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* right end position:
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** 6728877
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* centisome position:
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** 87.03508   
 
* Synonym(s):
 
* Synonym(s):
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** 2-methylbutyrate biosynthesis
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** Esi_0111_0044
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** Esi0111_0044
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** DPAGT1
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''4''' reactions found over '''6''' reactions in the full pathway
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* Reaction: [[2.7.8.15-RXN]]
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* [[1.1.1.178-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 0 associated gene:
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*** Assignment: ec-number
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-aragem]]
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*** [[annotation-esiliculosus_genome]]
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* Reaction: [[PHOSNACMURPENTATRANS-RXN]]
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* [[2-METHYLACYL-COA-DEHYDROGENASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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** 0 associated gene:
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*** Assignment: go-term
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** 1 reconstruction source(s) associated:
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* Reaction: [[RXN-11347]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[METHYLACETOACETYLCOATHIOL-RXN]]
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*** Assignment: go-term
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** 3 associated gene(s):
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* Reaction: [[RXN-8975]]
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*** [[Ec-22_002850]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_003940]]
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*** Assignment: go-term
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*** [[Ec-24_000870]]
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== Pathways associated ==
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** 2 reconstruction source(s) associated:
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* [[PWY-6470]]
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*** [[annotation-esiliculosus_genome]]
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* [[PWY-6471]]
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*** [[orthology-aragem]]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
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* [[TIGLYLCOA-HYDROXY-RXN]]
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* [[PEPTIDOGLYCANSYN-PWY]]
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** 5 associated gene(s):
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* [[PWY-5265]]
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*** [[Ec-14_006530]]
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*** [[Ec-17_000320]]
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*** [[Ec-06_001380]]
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*** [[Ec-16_001250]]
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*** [[Ec-16_003560]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PROPIONATE-COA-TRANSFERASE-RXN PROPIONATE-COA-TRANSFERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15031 RXN-15031]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33208}}
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{{#set: left end position=6721223}}
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{{#set: common name=2-methylbutanoate biosynthesis}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=2-methylbutyrate biosynthesis}}
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{{#set: right end position=6728877}}
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{{#set: reaction found=4}}
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{{#set: centisome position=87.03508    }}
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{{#set: total reaction=6}}
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{{#set: common name=Esi_0111_0044|Esi0111_0044|DPAGT1}}
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{{#set: completion rate=67.0}}
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{{#set: reaction associated=2.7.8.15-RXN|PHOSNACMURPENTATRANS-RXN|RXN-11347|RXN-8975}}
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{{#set: pathway associated=PWY-6470|PWY-6471|MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS|PEPTIDOGLYCANSYN-PWY|PWY-5265}}

Revision as of 14:28, 21 March 2018

Gene Ec-07_007020

  • left end position:
    • 6721223
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6728877
  • centisome position:
    • 87.03508
  • Synonym(s):
    • Esi_0111_0044
    • Esi0111_0044
    • DPAGT1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-6731&oldid=18847"