Difference between revisions of "ARGDEG-V-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] == * direction: ** LEFT-TO-RIGHT * common name: ** Protein of unknown function D...")
(Created page with "Category:Gene == Gene Ec-19_003040 == * left end position: ** 3312583 * transcription direction: ** NEGATIVE * right end position: ** 3324940 * centisome position: ** 55.4...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3422 RXN-3422] ==
+
== Gene Ec-19_003040 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3312583
−
* common name:
+
* transcription direction:
−
** Protein of unknown function DUF858, methyltransferase-like
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
+
** 3324940
 +
* centisome position:
 +
** 55.48076   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0592_0001
 +
** Esi0592_0001
 +
** ACC
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[5-HYDROXY-FERULIC-ACID]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SINAPATE]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 5-hydroxyferulate[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 sinapate[c]
+
* Reaction: [[RXN0-5055]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-01_004720]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY0-1264]]
 +
* [[PWY-7388]]
 +
* [[PWY-5789]]
 +
* [[PWY-5743]]
 +
* [[PWY-5744]]
 +
* [[PWY-6722]]
 +
* [[PWY-6679]]
 +
* [[PWY-4381]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=3312583}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02379 R02379]
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=3324940}}
−
{{#set: common name=Protein of unknown function DUF858, methyltransferase-like}}
+
{{#set: centisome position=55.48076    }}
−
{{#set: ec number=EC-2.1.1.68}}
+
{{#set: common name=Esi_0592_0001|Esi0592_0001|ACC}}
−
{{#set: gene associated=Ec-01_004720}}
+
{{#set: reaction associated=ACETYL-COA-CARBOXYLTRANSFER-RXN|RXN0-5055}}
−
{{#set: in pathway=PWY-2181}}
+
{{#set: pathway associated=PWY0-1264|PWY-7388|PWY-5789|PWY-5743|PWY-5744|PWY-6722|PWY-6679|PWY-4381}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:28, 21 March 2018

Gene Ec-19_003040

  • left end position:
    • 3312583
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3324940
  • centisome position:
    • 55.48076
  • Synonym(s):
    • Esi_0592_0001
    • Esi0592_0001
    • ACC

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=ARGDEG-V-PWY&oldid=18859"