Difference between revisions of "Ec-00 005930"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2562 RXN-2562] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2562 RXN-2562] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** protein ubiquitylation
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** [http://enzyme.expasy.org/EC/2.1.1.95 EC-2.1.1.95]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''9''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[RXN-15556]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DELTA-TOCOPHEROL]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[BETA-TOCOPHEROL]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** 14 associated gene(s):
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* With common name(s):
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*** [[Ec-14_005080]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 δ-tocopherol[c] '''=>''' 1 H+[c] '''+''' 1 β-tocopherol[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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*** [[Ec-28_000490]]
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*** [[Ec-08_003600]]
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== Genes associated with this reaction  ==
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*** [[Ec-09_004750]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-12_005810]]
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* Gene: [[Ec-18_000910]]
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*** [[Ec-08_002220]]
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** Source: [[orthology-aragem]]
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*** [[Ec-09_003260]]
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== Pathways  ==
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*** [[Ec-10_003200]]
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
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*** [[Ec-26_004480]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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*** [[Ec-00_001460]]
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== Reconstruction information  ==
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*** [[Ec-08_005320]]
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* Category: [[orthology]]
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*** [[Ec-08_005090]]
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** Source: [[orthology-aragem]]
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*** [[Ec-16_005210]]
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*** Tool: [[pantograph]]
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*** [[Ec-13_002970]]
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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* [[RXN-15559]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-15560]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-15561]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-15563]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-15564]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16313]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16314]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** 25 associated gene(s):
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*** [[Ec-01_007490]]
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*** [[Ec-00_007160]]
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*** [[Ec-25_002490]]
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*** [[Ec-14_006720]]
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*** [[Ec-01_009550]]
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*** [[Ec-25_000910]]
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*** [[Ec-09_000720]]
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*** [[Ec-22_002200]]
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*** [[Ec-25_000920]]
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*** [[Ec-01_001660]]
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*** [[Ec-14_001990]]
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*** [[Ec-01_010570]]
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*** [[Ec-27_002840]]
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*** [[Ec-06_002450]]
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*** [[Ec-25_000510]]
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*** [[Ec-16_001360]]
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*** [[Ec-14_003730]]
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*** [[Ec-13_002660]]
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*** [[Ec-24_003940]]
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*** [[Ec-26_001140]]
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*** [[Ec-09_004750]]
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*** [[Ec-12_000320]]
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*** [[Ec-18_001830]]
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*** [[Ec-25_002630]]
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*** [[Ec-01_008900]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: common name=protein ubiquitylation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07504 R07504]
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{{#set: reaction found=9}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=9}}
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{{#set: ec number=EC-2.1.1.95}}
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{{#set: completion rate=100.0}}
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{{#set: gene associated=Ec-18_000910}}
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{{#set: in pathway=PWY-1422}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:28, 21 March 2018

Reaction RXN-2562

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-00_005930&oldid=18906"